RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C CUP9P41817 306 aa1.89□□□□□ -2.11
BRE1YDL074C SPG5P42933 373 aa1.89□□□□□ -2.11
BRE1YDL074C ERJ5P43613 295 aaPredicted RBP1.89□□□□□ -2.11
BRE1YDL074C CIN2P46670 268 aa1.89□□□□□ -2.11
BRE1YDL074C GPI14P47088 403 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C PMT3P47190 753 aa1.89□□□□□ -2.11
BRE1YDL074C SKP1P52286 194 aa1.89□□□□□ -2.11
BRE1YDL074C YNR048WP53740 393 aa1.89□□□□□ -2.11
BRE1YDL074C AAH1P53909 347 aa1.89□□□□□ -2.11
BRE1YDL074C RSM23Q01163 450 aa1.89□□□□□ -2.11
BRE1YDL074C TIM44Q01852 431 aa1.89□□□□□ -2.11
BRE1YDL074C YMR265CQ03508 461 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C SPR28Q04921 423 aa1.89□□□□□ -2.11
BRE1YDL074C COX20Q04935 205 aa1.89□□□□□ -2.11
BRE1YDL074C PAL1Q05518 499 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C BER1Q06688 274 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C CDA2Q06703 312 aa1.89□□□□□ -2.11
BRE1YDL074C MIM1Q08176 113 aa1.89□□□□□ -2.11
BRE1YDL074C YOL073CQ08232 322 aa1.89□□□□□ -2.11
BRE1YDL074C ZEO1Q08245 113 aa1.89□□□□□ -2.11
BRE1YDL074C HRT1Q08273 121 aa1.89□□□□□ -2.11
BRE1YDL074C RDR1Q08904 546 aa1.89□□□□□ -2.11
BRE1YDL074C ENV7Q12003 364 aa1.89□□□□□ -2.11
BRE1YDL074C FCF2Q12035 217 aaPredicted RBP1.89□□□□□ -2.11
BRE1YDL074C LYS21Q12122 440 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C USB1Q12208 290 aaKnown RBP1.89□□□□□ -2.11
BRE1YDL074C VAM3Q12241 283 aa1.89□□□□□ -2.11
BRE1YDL074C PRP46Q12417 451 aaPredicted RBP1.89□□□□□ -2.11
BRE1YDL074C YOR343CQ12484 108 aa1.89□□□□□ -2.11
BRE1YDL074C FMP16Q12497 93 aa1.89□□□□□ -2.11
BRE1YDL074C YAL064W-BO13512 126 aa1.88□□□□□ -2.11
BRE1YDL074C COX1P00401 534 aa1.88□□□□□ -2.11
BRE1YDL074C YPT1P01123 206 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C REP2P03872 296 aa1.88□□□□□ -2.11
BRE1YDL074C RPS13P05756 151 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C PRB1P09232 635 aa1.88□□□□□ -2.11
BRE1YDL074C PUT1P09368 476 aa1.88□□□□□ -2.11
BRE1YDL074C RPL1AP0CX43 217 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C RPL1BP0CX44 217 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C SNF5P18480 905 aa1.88□□□□□ -2.11
BRE1YDL074C MEK1P24719 497 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C YCR101CP25607 182 aa1.88□□□□□ -2.11
BRE1YDL074C AFG1P32317 509 aa1.88□□□□□ -2.11
BRE1YDL074C DBF20P32328 564 aa1.88□□□□□ -2.11
BRE1YDL074C PPZ2P33329 710 aa1.88□□□□□ -2.11
BRE1YDL074C PAN3P36102 679 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C FRM2P37261 193 aa1.88□□□□□ -2.11
BRE1YDL074C YER010CP40011 234 aa1.88□□□□□ -2.11
BRE1YDL074C QDR1P40475 563 aa1.88□□□□□ -2.11
BRE1YDL074C YJR120WP47157 116 aa1.88□□□□□ -2.11
BRE1YDL074C JAC1P53193 184 aa1.88□□□□□ -2.11
BRE1YDL074C CWC25P53854 179 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C PET191Q02772 108 aa1.88□□□□□ -2.11
BRE1YDL074C NGL2Q03264 515 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C CGI121Q03705 181 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C YDR248CQ03786 193 aa1.88□□□□□ -2.11
BRE1YDL074C VBA4Q04602 768 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C MRX9Q07349 420 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C PRP11Q07350 266 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C YOL029CQ08187 201 aa1.88□□□□□ -2.11
BRE1YDL074C RDL2Q08742 149 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C SCP1Q08873 200 aa1.88□□□□□ -2.11
BRE1YDL074C GRE1Q08969 168 aa1.88□□□□□ -2.11
BRE1YDL074C AKR2Q12013 749 aa1.88□□□□□ -2.11
BRE1YDL074C ORT1Q12375 292 aa1.88□□□□□ -2.11
BRE1YDL074C ODC2Q99297 307 aa1.88□□□□□ -2.11
BRE1YDL074C PET20Q99373 253 aa1.88□□□□□ -2.11
BRE1YDL074C VPS13Q07878 3144 aa1.88□□□□□ -2.11
BRE1YDL074C TDH3P00359 332 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
BRE1YDL074C FUR4P05316 633 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C CDC36P06100 191 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C CYT1P07143 309 aa1.88□□□□□ -2.11
BRE1YDL074C PHO2P07269 559 aa1.88□□□□□ -2.11
BRE1YDL074C DAT1P13483 248 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C RPB8P20436 146 aa1.88□□□□□ -2.11
BRE1YDL074C YCP4P25349 247 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C PET18P25362 215 aa1.88□□□□□ -2.11
BRE1YDL074C YCR061WP25639 631 aa1.88□□□□□ -2.11
BRE1YDL074C CPR3P25719 182 aa1.88□□□□□ -2.11
BRE1YDL074C TRR1P29509 319 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C LDS1P31379 325 aa1.88□□□□□ -2.11
BRE1YDL074C ERG3P32353 365 aa1.88□□□□□ -2.11
BRE1YDL074C MCM10P32354 571 aa1.88□□□□□ -2.11
BRE1YDL074C SRB6P32570 121 aa1.88□□□□□ -2.11
BRE1YDL074C EMP70P32802 667 aa1.88□□□□□ -2.11
BRE1YDL074C PDC2P32896 925 aa1.88□□□□□ -2.11
BRE1YDL074C MRPL27P36526 146 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C TCM62P38228 572 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C UBS1P38290 277 aa1.88□□□□□ -2.11
BRE1YDL074C UMP1P38293 148 aa1.88□□□□□ -2.11
BRE1YDL074C ASP1P38986 381 aaPredicted RBP1.88□□□□□ -2.11
BRE1YDL074C PZF1P39933 429 aa1.88□□□□□ -2.11
BRE1YDL074C YIL152WP40455 235 aa1.88□□□□□ -2.11
BRE1YDL074C TIR3P40552 269 aa1.88□□□□□ -2.11
BRE1YDL074C REE1P40893 198 aa1.88□□□□□ -2.11
BRE1YDL074C YGR210CP42942 411 aa1.88□□□□□ -2.11
BRE1YDL074C NIT2P47016 307 aa1.88□□□□□ -2.11
BRE1YDL074C BXI1P48558 297 aa1.88□□□□□ -2.11
BRE1YDL074C LYS20P48570 428 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C UFD1P53044 361 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms