RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	YPR170W-B	P0C5R9	85 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	CBS1	P14066	229 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	GEX1	P25596	615 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	CLB6	P32943	380 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	ACA1	P39970	489 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	LTP1	P40347	161 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	PET130	P47065	347 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	EXG2	P52911	562 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	PNC1	P53184	216 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	THG1	P53215	237 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	GIS1	Q03833	894 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	SWM1	Q12379	170 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	YKL018C-A	Q3E7A7	99 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	ILV1	P00927	576 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	YCR015C	P25616	317 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	LOT5	P34234	306 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	IRS4	P36115	615 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	PFS1	P38872	237 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	CHL4	P38907	458 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	SWM2	P40342	146 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	CAT5	P41735	233 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	SHR5	P41912	237 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	YNR014W	P53719	212 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	YIF1	P53845	314 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	YCT1	Q12235	531 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	COA6	Q3E846	104 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	MES1	P00958	751 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	YML003W	P0CF16	290 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	NHP6B	P11633	99 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
VHC1	YBR235W	PRE8	P23639	250 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	YIH1	P25637	258 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	UPS2	P35200	230 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	SPT23	P35210	1082 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	VAC8	P39968	578 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	GPI14	P47088	403 aa	Known RBP	4.23	□□□□□ -1.73
VHC1	YBR235W	GTO3	Q04806	366 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	CTS2	Q06350	511 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	IPK1	Q06667	281 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	IRC13	Q08630	104 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	ATG41	Q12048	136 aa		4.23	□□□□□ -1.73
VHC1	YBR235W	COX3	P00420	269 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	HIS1	P00498	297 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	SIR2	P06700	562 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	STE14	P32584	239 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	ARG2	P40360	574 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	AVT7	P40501	490 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	POP1	P41812	875 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	MAF1	P41910	395 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	APM1	Q00776	475 aa	Predicted RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	CAB5	Q03941	241 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	ARA2	Q04212	335 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	MRX8	Q05473	314 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	COQ11	Q05892	277 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	SKS1	Q12505	502 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	QCR2	P07257	368 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	SAG1	P20840	650 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	SGF29	P25554	259 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	DAD2	P36162	133 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	RIB5	P38145	238 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	LDB7	P38210	180 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	RTC2	P38279	296 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	YHL044W	P38727	235 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	GCV1	P48015	400 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	YIP3	P53633	176 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	INP1	Q03694	420 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	DPP1	Q05521	289 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	MMT2	Q08970	484 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	YLR050C	Q12155	161 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	SNF8	Q12483	233 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	YBL112C	Q3E7Y4	105 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	FKS1	P38631	1876 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	SFK1	P35735	353 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	TAT2	P38967	592 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	EAF5	P39995	279 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	NIT1	P40447	199 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	CDC40	P40968	455 aa	Predicted RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	YJR120W	P47157	116 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	SAY1	P53324	424 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	CUR1	Q06469	252 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	UBX3	Q12229	455 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	TY1A-NL1	Q12391	440 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	PAR32	Q12515	295 aa	Known RBP	4.22	□□□□□ -1.73
VHC1	YBR235W	YLR099W-A	Q3E798	87 aa		4.22	□□□□□ -1.73
VHC1	YBR235W	CDC9	P04819	755 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	OLE1	P21147	510 aa	Known RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	LSB5	P25369	354 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	MCH2	P36032	473 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	COQ5	P49017	307 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	SYF2	P53277	215 aa	Predicted RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	HPT1	Q04178	221 aa	Known RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	PHO2	P07269	559 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	SPT15	P13393	240 aa	Known RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	PDA1	P16387	420 aa	Known RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	ARO4	P32449	370 aa	Known RBP	4.21	□□□□□ -1.74
VHC1	YBR235W	MNS1	P32906	549 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	RCR1	P38212	213 aa		4.21	□□□□□ -1.74
VHC1	YBR235W	SAF1	P38352	637 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms