RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W NSA1P53136 463 aaPredicted RBP2.47□□□□□ -2.01
SWD3YBR175W SSU72P53538 206 aaPredicted RBP2.47□□□□□ -2.01
SWD3YBR175W YIP3P53633 176 aa2.47□□□□□ -2.01
SWD3YBR175W RTC4P53850 401 aa2.47□□□□□ -2.01
SWD3YBR175W YLR152CP54072 576 aa2.47□□□□□ -2.01
SWD3YBR175W PRP38Q00723 242 aaPredicted RBP2.47□□□□□ -2.01
SWD3YBR175W RRP17Q04031 235 aaPredicted RBP2.47□□□□□ -2.01
SWD3YBR175W FSH2Q05015 223 aa2.47□□□□□ -2.01
SWD3YBR175W YLR281CQ05863 155 aa2.47□□□□□ -2.01
SWD3YBR175W RIF2Q06208 395 aa2.47□□□□□ -2.01
SWD3YBR175W HEM25Q07534 307 aa2.47□□□□□ -2.01
SWD3YBR175W MIM1Q08176 113 aa2.47□□□□□ -2.01
SWD3YBR175W YSP2Q06681 1438 aa2.46□□□□□ -2.02
SWD3YBR175W HHF1P02309 103 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W MSI1P13712 422 aa2.46□□□□□ -2.02
SWD3YBR175W PPH21P23594 369 aa2.46□□□□□ -2.02
SWD3YBR175W URA10P30402 227 aa2.46□□□□□ -2.02
SWD3YBR175W CDC13P32797 924 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W SGE1P33335 543 aa2.46□□□□□ -2.02
SWD3YBR175W KDX1P36005 433 aa2.46□□□□□ -2.02
SWD3YBR175W GPX1P36014 167 aa2.46□□□□□ -2.02
SWD3YBR175W MAK5P38112 773 aaPredicted RBP2.46□□□□□ -2.02
SWD3YBR175W HEK2P38199 381 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SWD3YBR175W LSM12P38828 187 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W YHR127WP38833 243 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W YND1P40009 630 aa2.46□□□□□ -2.02
SWD3YBR175W YER121WP40076 114 aa2.46□□□□□ -2.02
SWD3YBR175W YJL213WP40896 331 aa2.46□□□□□ -2.02
SWD3YBR175W EGT2P42835 1041 aa2.46□□□□□ -2.02
SWD3YBR175W YJR141WP47172 347 aaPredicted RBP2.46□□□□□ -2.02
SWD3YBR175W PRP24P49960 444 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W COS10P52924 374 aa2.46□□□□□ -2.02
SWD3YBR175W SLX9P53251 210 aaPredicted RBP2.46□□□□□ -2.02
SWD3YBR175W CLD1P53264 445 aa2.46□□□□□ -2.02
SWD3YBR175W YNR066CP53752 436 aa2.46□□□□□ -2.02
SWD3YBR175W YET2Q04210 160 aa2.46□□□□□ -2.02
SWD3YBR175W LOA1Q06508 300 aa2.46□□□□□ -2.02
SWD3YBR175W COQ10Q08058 207 aa2.46□□□□□ -2.02
SWD3YBR175W RPN8Q08723 338 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W MMT2Q08970 484 aa2.46□□□□□ -2.02
SWD3YBR175W YPL245WQ12179 454 aaKnown RBP2.46□□□□□ -2.02
SWD3YBR175W RFM1Q12192 310 aa2.46□□□□□ -2.02
SWD3YBR175W SFM1Q12314 213 aa2.46□□□□□ -2.02
SWD3YBR175W GDB1Q06625 1536 aa2.46□□□□□ -2.02
SWD3YBR175W YOR1P53049 1477 aa2.45□□□□□ -2.02
SWD3YBR175W VPS13Q07878 3144 aa2.45□□□□□ -2.02
SWD3YBR175W SPT3P06844 337 aa2.45□□□□□ -2.02
SWD3YBR175W PHO2P07269 559 aa2.45□□□□□ -2.02
SWD3YBR175W YKR104WP0CE69 306 aa2.45□□□□□ -2.02
SWD3YBR175W PHO80P20052 293 aa2.45□□□□□ -2.02
SWD3YBR175W MCK1P21965 375 aaKnown RBP2.45□□□□□ -2.02
SWD3YBR175W DPB2P24482 689 aaPredicted RBP2.45□□□□□ -2.02
SWD3YBR175W CPR4P25334 318 aa2.45□□□□□ -2.02
SWD3YBR175W GIT1P25346 518 aa2.45□□□□□ -2.02
SWD3YBR175W ATG15P25641 520 aa2.45□□□□□ -2.02
SWD3YBR175W SEC1P30619 724 aaKnown RBP2.45□□□□□ -2.02
SWD3YBR175W LDS1P31379 325 aa2.45□□□□□ -2.02
SWD3YBR175W VPH2P32341 215 aa2.45□□□□□ -2.02
SWD3YBR175W SPS18P32572 300 aa2.45□□□□□ -2.02
SWD3YBR175W MRPL3P36516 390 aa2.45□□□□□ -2.02
SWD3YBR175W YCR087C-AP37263 153 aa2.45□□□□□ -2.02
SWD3YBR175W MRP21P38175 177 aa2.45□□□□□ -2.02
SWD3YBR175W FES1P38260 290 aa2.45□□□□□ -2.02
SWD3YBR175W SRP14P38985 146 aa2.45□□□□□ -2.02
SWD3YBR175W PTI1P39927 425 aaPredicted RBP2.45□□□□□ -2.02
SWD3YBR175W KRE29P40026 464 aa2.45□□□□□ -2.02
SWD3YBR175W YIL067CP40514 678 aa2.45□□□□□ -2.02
SWD3YBR175W TMA22P47089 198 aaPredicted RBP2.45□□□□□ -2.02
SWD3YBR175W MSO1P53604 210 aaKnown RBP2.45□□□□□ -2.02
SWD3YBR175W CWC25P53854 179 aaKnown RBP2.45□□□□□ -2.02
SWD3YBR175W TPS1Q00764 495 aaKnown RBP2.45□□□□□ -2.02
SWD3YBR175W ESP1Q03018 1630 aa2.44□□□□□ -2.02
SWD3YBR175W YMR316C-AI2HB70 103 aa2.44□□□□□ -2.02
SWD3YBR175W QCR2P07257 368 aa2.44□□□□□ -2.02
SWD3YBR175W RPL4AP10664 362 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W URA6P15700 204 aa2.44□□□□□ -2.02
SWD3YBR175W RPB5P20434 215 aa2.44□□□□□ -2.02
SWD3YBR175W YCR043CP25361 127 aa2.44□□□□□ -2.02
SWD3YBR175W RFT1P38206 574 aaPredicted RBP2.44□□□□□ -2.02
SWD3YBR175W MBA1P38300 278 aa2.44□□□□□ -2.02
SWD3YBR175W AME1P38313 324 aa2.44□□□□□ -2.02
SWD3YBR175W GRE3P38715 327 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SWD3YBR175W YNL208WP40159 199 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W YKE4P40544 346 aa2.44□□□□□ -2.02
SWD3YBR175W SNZ3P43545 298 aa2.44□□□□□ -2.02
SWD3YBR175W IRC18P47056 224 aa2.44□□□□□ -2.02
SWD3YBR175W MCM22P47167 239 aa2.44□□□□□ -2.02
SWD3YBR175W YJR149WP47177 404 aa2.44□□□□□ -2.02
SWD3YBR175W OST3P48439 350 aa2.44□□□□□ -2.02
SWD3YBR175W RPL4BP49626 362 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W BNS1P50084 137 aa2.44□□□□□ -2.02
SWD3YBR175W BRR6P53062 197 aa2.44□□□□□ -2.02
SWD3YBR175W MMS2P53152 137 aa2.44□□□□□ -2.02
SWD3YBR175W YGL039WP53183 348 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W COG7P53195 279 aa2.44□□□□□ -2.02
SWD3YBR175W SNZ2P53824 298 aa2.44□□□□□ -2.02
SWD3YBR175W FYV6P53913 173 aa2.44□□□□□ -2.02
SWD3YBR175W SDC1Q03323 175 aa2.44□□□□□ -2.02
SWD3YBR175W UTP15Q04305 513 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W SPG4Q04438 115 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms