RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YIL012WP40551 113 aa1.69□□□□□ -2.14
SNC1YAL030W COQ5P49017 307 aa1.69□□□□□ -2.14
SNC1YAL030W MIC26P50087 233 aa1.69□□□□□ -2.14
SNC1YAL030W UFD1P53044 361 aa1.69□□□□□ -2.14
SNC1YAL030W YGL118CP53132 145 aa1.69□□□□□ -2.14
SNC1YAL030W FMP41P53889 259 aaKnown RBP1.69□□□□□ -2.14
SNC1YAL030W YNL095CP53932 642 aa1.69□□□□□ -2.14
SNC1YAL030W MRS2Q01926 470 aa1.69□□□□□ -2.14
SNC1YAL030W YMR166CQ03829 368 aa1.69□□□□□ -2.14
SNC1YAL030W YMR244WQ04018 355 aa1.69□□□□□ -2.14
SNC1YAL030W DCR2Q05924 578 aa1.69□□□□□ -2.14
SNC1YAL030W YPR098CQ06089 161 aa1.69□□□□□ -2.14
SNC1YAL030W PIN3Q06449 215 aa1.69□□□□□ -2.14
SNC1YAL030W YPL119C-AQ3E751 87 aa1.69□□□□□ -2.14
SNC1YAL030W CCH1P50077 2039 aa1.68□□□□□ -2.14
SNC1YAL030W THP2O13539 261 aaKnown RBP1.68□□□□□ -2.14
SNC1YAL030W ADH1P00330 348 aaKnown RBP1.68□□□□□ -2.14
SNC1YAL030W YKR104WP0CE69 306 aa1.68□□□□□ -2.14
SNC1YAL030W YCR102CP25608 368 aa1.68□□□□□ -2.14
SNC1YAL030W BMH1P29311 267 aaKnown RBP1.68□□□□□ -2.14
SNC1YAL030W ERG2P32352 222 aa1.68□□□□□ -2.14
SNC1YAL030W YOX1P34161 385 aa1.68□□□□□ -2.14
SNC1YAL030W HMT1P38074 348 aa1.68□□□□□ -2.14
SNC1YAL030W MAL32P38158 584 aa1.68□□□□□ -2.14
SNC1YAL030W YBR096WP38256 230 aa1.68□□□□□ -2.14
SNC1YAL030W PHO89P38361 574 aa1.68□□□□□ -2.14
SNC1YAL030W CUE1P38428 203 aa1.68□□□□□ -2.14
SNC1YAL030W SEO1P39709 593 aa1.68□□□□□ -2.14
SNC1YAL030W PRE6P40303 254 aaKnown RBP1.68□□□□□ -2.14
SNC1YAL030W YFL012WP43580 148 aa1.68□□□□□ -2.14
SNC1YAL030W NSA1P53136 463 aaPredicted RBP1.68□□□□□ -2.14
SNC1YAL030W YGR018CP53211 109 aa1.68□□□□□ -2.14
SNC1YAL030W YGR067CP53243 804 aa1.68□□□□□ -2.14
SNC1YAL030W MAL12P53341 584 aa1.68□□□□□ -2.14
SNC1YAL030W AAH1P53909 347 aa1.68□□□□□ -2.14
SNC1YAL030W SPG4Q04438 115 aa1.68□□□□□ -2.14
SNC1YAL030W PEX10Q05568 337 aa1.68□□□□□ -2.14
SNC1YAL030W SSQ1Q05931 657 aaPredicted RBP1.68□□□□□ -2.14
SNC1YAL030W COQ10Q08058 207 aa1.68□□□□□ -2.14
SNC1YAL030W RRP40Q08285 240 aaKnown RBP1.68□□□□□ -2.14
SNC1YAL030W TIR4Q12218 487 aaPredicted RBP1.68□□□□□ -2.14
SNC1YAL030W SPT3P06844 337 aa1.67□□□□□ -2.14
SNC1YAL030W CDC33P07260 213 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W BCY1P07278 416 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W YBR121C-AP0C5L4 52 aa1.67□□□□□ -2.14
SNC1YAL030W COS2P0CX12 379 aa1.67□□□□□ -2.14
SNC1YAL030W COS3P0CX13 379 aa1.67□□□□□ -2.14
SNC1YAL030W STE18P18852 110 aa1.67□□□□□ -2.14
SNC1YAL030W COX10P21592 462 aa1.67□□□□□ -2.14
SNC1YAL030W RPB9P27999 122 aa1.67□□□□□ -2.14
SNC1YAL030W SSO1P32867 290 aa1.67□□□□□ -2.14
SNC1YAL030W SGE1P33335 543 aa1.67□□□□□ -2.14
SNC1YAL030W PRP18P33411 251 aaPredicted RBP1.67□□□□□ -2.14
SNC1YAL030W DRE2P36152 348 aa1.67□□□□□ -2.14
SNC1YAL030W RIB1P38066 345 aa1.67□□□□□ -2.14
SNC1YAL030W URA8P38627 578 aaPredicted RBP1.67□□□□□ -2.14
SNC1YAL030W YHL049CP38722 271 aa1.67□□□□□ -2.14
SNC1YAL030W YHB1P39676 399 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W BDH1P39714 382 aa1.67□□□□□ -2.14
SNC1YAL030W ERG28P40030 148 aa1.67□□□□□ -2.14
SNC1YAL030W SYS1P41544 203 aa1.67□□□□□ -2.14
SNC1YAL030W COS4P43542 379 aa1.67□□□□□ -2.14
SNC1YAL030W CPR7P47103 393 aa1.67□□□□□ -2.14
SNC1YAL030W HAM1P47119 197 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W MRH4P53166 561 aa1.67□□□□□ -2.14
SNC1YAL030W CAX4P53223 239 aa1.67□□□□□ -2.14
SNC1YAL030W ZRG17P53735 605 aa1.67□□□□□ -2.14
SNC1YAL030W SWT21P53873 357 aaPredicted RBP1.67□□□□□ -2.14
SNC1YAL030W RHO3Q00245 231 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W SMD1Q02260 146 aaPredicted RBP1.67□□□□□ -2.14
SNC1YAL030W CTF19Q02732 369 aa1.67□□□□□ -2.14
SNC1YAL030W TLG1Q03322 224 aa1.67□□□□□ -2.14
SNC1YAL030W TVP15Q03860 143 aa1.67□□□□□ -2.14
SNC1YAL030W YDR124WQ04608 324 aa1.67□□□□□ -2.14
SNC1YAL030W YMR226CQ05016 267 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W ATG38Q05789 226 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W NNT1Q05874 261 aa1.67□□□□□ -2.14
SNC1YAL030W YPR147CQ06522 304 aaKnown RBP1.67□□□□□ -2.14
SNC1YAL030W PLB3Q08108 686 aa1.67□□□□□ -2.14
SNC1YAL030W GIS3Q12418 502 aa1.67□□□□□ -2.14
SNC1YAL030W YKL183C-AQ3E765 70 aa1.67□□□□□ -2.14
SNC1YAL030W AUS1Q08409 1394 aa1.67□□□□□ -2.14
SNC1YAL030W SOD1P00445 154 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W CDC36P06100 191 aaPredicted RBP1.66□□□□□ -2.14
SNC1YAL030W CUP2P15315 225 aa1.66□□□□□ -2.14
SNC1YAL030W FUS3P16892 353 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W YMR31P19955 123 aa1.66□□□□□ -2.14
SNC1YAL030W GDH2P33327 1092 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W PRX1P34227 261 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W CSG2P35206 410 aa1.66□□□□□ -2.14
SNC1YAL030W MID2P36027 376 aa1.66□□□□□ -2.14
SNC1YAL030W UTH1P36135 365 aa1.66□□□□□ -2.14
SNC1YAL030W MRPL39P36533 70 aa1.66□□□□□ -2.14
SNC1YAL030W MIC12P38341 106 aa1.66□□□□□ -2.14
SNC1YAL030W YHR127WP38833 243 aaKnown RBP1.66□□□□□ -2.14
SNC1YAL030W RPE1P46969 238 aa1.66□□□□□ -2.14
SNC1YAL030W MCM22P47167 239 aa1.66□□□□□ -2.14
SNC1YAL030W RAD17P48581 401 aa1.66□□□□□ -2.14
SNC1YAL030W RSM27P53305 110 aa1.66□□□□□ -2.14
SNC1YAL030W CUS2P53830 285 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms