RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 RPS5P26783 225 aaKnown RBP12.6□□□□□ -0.39
SCR1SCR1 PAU24P38155 120 aa12.6□□□□□ -0.39
SCR1SCR1 GOS1P38736 223 aa12.6□□□□□ -0.39
SCR1SCR1 ABM1P47146 123 aa12.6□□□□□ -0.39
SCR1SCR1 TYW3P53177 273 aa12.6□□□□□ -0.39
SCR1SCR1 DBP2P24783 546 aaKnown RBP12.59□□□□□ -0.39
SCR1SCR1 VMA6P32366 345 aaKnown RBP12.59□□□□□ -0.39
SCR1SCR1 YIR020CP40575 100 aa12.59□□□□□ -0.39
SCR1SCR1 YGL204CP53089 101 aa12.59□□□□□ -0.39
SCR1SCR1 MSS11Q03825 758 aa12.59□□□□□ -0.39
SCR1SCR1 DLT1Q04216 342 aa12.59□□□□□ -0.39
SCR1SCR1 RRP15Q06511 250 aaPredicted RBP12.59□□□□□ -0.39
SCR1SCR1 RFU1Q08003 200 aa12.59□□□□□ -0.39
SCR1SCR1 URA2P07259 2214 aaKnown RBP12.58□□□□□ -0.39
SCR1SCR1 MSI1P13712 422 aa12.58□□□□□ -0.4
SCR1SCR1 AVT6P40074 448 aa12.58□□□□□ -0.4
SCR1SCR1 DDI1P40087 428 aa12.58□□□□□ -0.4
SCR1SCR1 NCA3P46955 337 aa12.58□□□□□ -0.4
SCR1SCR1 RBD2Q12270 262 aa12.58□□□□□ -0.4
SCR1SCR1 RTR2Q12378 196 aa12.58□□□□□ -0.4
SCR1SCR1 AFG1P32317 509 aa12.57□□□□□ -0.4
SCR1SCR1 DOA4P32571 926 aa12.57□□□□□ -0.4
SCR1SCR1 REC114P32841 428 aa12.57□□□□□ -0.4
SCR1SCR1 GLR1P41921 483 aaKnown RBP12.57□□□□□ -0.4
SCR1SCR1 CIN2P46670 268 aa12.57□□□□□ -0.4
SCR1SCR1 PEF1P53238 335 aa12.57□□□□□ -0.4
SCR1SCR1 FRE5Q08908 694 aa12.57□□□□□ -0.4
SCR1SCR1 TY1A-NL1Q12391 440 aaKnown RBP12.57□□□□□ -0.4
SCR1SCR1 PRE7P23724 241 aaKnown RBP12.56□□□□□ -0.4
SCR1SCR1 SDS24P38314 527 aa12.56□□□□□ -0.4
SCR1SCR1 SSH1P38353 490 aaKnown RBP12.56□□□□□ -0.4
SCR1SCR1 ERJ5P43613 295 aaPredicted RBP12.56□□□□□ -0.4
SCR1SCR1 TMA20P89886 181 aaPredicted RBP12.56□□□□□ -0.4
SCR1SCR1 PEX30Q06169 523 aa12.56□□□□□ -0.4
SCR1SCR1 SPS4P09937 338 aa12.55□□□□□ -0.4
SCR1SCR1 MTH1P35198 433 aa12.55□□□□□ -0.4
SCR1SCR1 SPO19Q03029 223 aa12.55□□□□□ -0.4
SCR1SCR1 CDC31P06704 161 aaKnown RBP12.54□□□□□ -0.4
SCR1SCR1 MED8P38304 223 aa12.54□□□□□ -0.4
SCR1SCR1 YCK3P39962 524 aa12.54□□□□□ -0.4
SCR1SCR1 ATF1P40353 525 aa12.54□□□□□ -0.4
SCR1SCR1 RBL2P48606 106 aaKnown RBP12.54□□□□□ -0.4
SCR1SCR1 YKR005CQ02203 525 aa12.54□□□□□ -0.4
SCR1SCR1 SGA1P08019 549 aa12.53□□□□□ -0.4
SCR1SCR1 MATALPHA1P0CY06 175 aa12.53□□□□□ -0.4
SCR1SCR1 HMLALPHA1P0CY07 175 aa12.53□□□□□ -0.4
SCR1SCR1 APA2P22108 325 aa12.53□□□□□ -0.4
SCR1SCR1 RCN1P36054 211 aa12.53□□□□□ -0.4
SCR1SCR1 TCM62P38228 572 aaKnown RBP12.53□□□□□ -0.4
SCR1SCR1 MSS4P38994 779 aa12.53□□□□□ -0.4
SCR1SCR1 SGN1P40561 250 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
SCR1SCR1 YGL159WP53110 370 aa12.53□□□□□ -0.4
SCR1SCR1 GRX3Q03835 250 aa12.53□□□□□ -0.4
SCR1SCR1 YMR252CQ04814 134 aa12.53□□□□□ -0.4
SCR1SCR1 MRX10Q05648 414 aa12.53□□□□□ -0.4
SCR1SCR1 SNA4Q07549 140 aa12.53□□□□□ -0.4
SCR1SCR1 RDL1Q12305 139 aaKnown RBP12.53□□□□□ -0.4
SCR1SCR1 YBL113CQ7M4S9 792 aa12.53□□□□□ -0.4
SCR1SCR1 QCR7P00128 127 aa12.52□□□□□ -0.41
SCR1SCR1 TDH2P00358 332 aaKnown RBP12.52□□□□□ -0.41
SCR1SCR1 SAG1P20840 650 aa12.52□□□□□ -0.41
SCR1SCR1 PPZ2P33329 710 aa12.52□□□□□ -0.41
SCR1SCR1 RPS0BP46654 252 aaKnown RBP12.52□□□□□ -0.41
SCR1SCR1 AVT4P50944 713 aa12.52□□□□□ -0.41
SCR1SCR1 PMT5P52867 743 aa12.52□□□□□ -0.41
SCR1SCR1 POP6P53218 158 aa12.52□□□□□ -0.41
SCR1SCR1 MAK3Q03503 176 aa12.52□□□□□ -0.41
SCR1SCR1 YDR248CQ03786 193 aa12.52□□□□□ -0.41
SCR1SCR1 HLR1Q04429 423 aa12.52□□□□□ -0.41
SCR1SCR1 SPR28Q04921 423 aa12.52□□□□□ -0.41
SCR1SCR1 PAU2P32612 120 aa12.51□□□□□ -0.41
SCR1SCR1 RIO2P40160 425 aaKnown RBP12.51□□□□□ -0.41
SCR1SCR1 YAE1P47118 141 aaPredicted RBP12.51□□□□□ -0.41
SCR1SCR1 BNA2P47125 453 aa12.51□□□□□ -0.41
SCR1SCR1 SMM1P53720 384 aaKnown RBP12.51□□□□□ -0.41
SCR1SCR1 ATG17Q06410 417 aa12.51□□□□□ -0.41
SCR1SCR1 FRE8Q12209 686 aa12.51□□□□□ -0.41
SCR1SCR1 RPL15AP05748 204 aaKnown RBP12.5□□□□□ -0.41
SCR1SCR1 SFK1P35735 353 aa12.5□□□□□ -0.41
SCR1SCR1 LYS20P48570 428 aaKnown RBP12.5□□□□□ -0.41
SCR1SCR1 RPL15BP54780 204 aaPredicted RBP12.5□□□□□ -0.41
SCR1SCR1 PRP3Q03338 469 aaPredicted RBP12.5□□□□□ -0.41
SCR1SCR1 LYS21Q12122 440 aaKnown RBP12.5□□□□□ -0.41
SCR1SCR1 YLR108CQ12259 485 aa12.5□□□□□ -0.41
SCR1SCR1 YLR099W-AQ3E798 87 aa12.5□□□□□ -0.41
SCR1SCR1 RPL39P04650 51 aa12.49□□□□□ -0.41
SCR1SCR1 HXT2P23585 541 aa12.49□□□□□ -0.41
SCR1SCR1 SNC2P33328 115 aa12.49□□□□□ -0.41
SCR1SCR1 MKS1P34072 584 aa12.49□□□□□ -0.41
SCR1SCR1 YOX1P34161 385 aa12.49□□□□□ -0.41
SCR1SCR1 OSH7P38755 437 aa12.49□□□□□ -0.41
SCR1SCR1 YHC3P47040 408 aa12.49□□□□□ -0.41
SCR1SCR1 EFM3P47163 339 aa12.49□□□□□ -0.41
SCR1SCR1 YIP4P53093 235 aa12.49□□□□□ -0.41
SCR1SCR1 GEP7P53171 287 aa12.49□□□□□ -0.41
SCR1SCR1 YPL067CQ02754 198 aa12.49□□□□□ -0.41
SCR1SCR1 MRX9Q07349 420 aaKnown RBP12.49□□□□□ -0.41
SCR1SCR1 YEL009C-AA0A023PZF2 135 aa12.48□□□□□ -0.41
SCR1SCR1 RTT105P40063 208 aa12.48□□□□□ -0.41
SCR1SCR1 YNR064CP53750 290 aa12.48□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms