RNA–Protein interactions for RNA: ENST00000586799.1

DNMT1-209, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-209ENST00000586799 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
DNMT1-209ENST00000586799 COLEC11Q9BWP8 271 aa13.09□□□□□ -0.31
DNMT1-209ENST00000586799 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
DNMT1-209ENST00000586799 UBN1Q9NPG3 1134 aa13.09□□□□□ -0.31
DNMT1-209ENST00000586799 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-209ENST00000586799 FBXW11Q9UKB1 542 aa13.09□□□□□ -0.31
DNMT1-209ENST00000586799 F5P12259 2224 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 ARL5CA6NH57 179 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 CCL16O15467 120 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-209ENST00000586799 NR1I2O75469 434 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 ITGA4P13612 1032 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 GNA11P29992 359 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 SFNP31947 248 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 MLH1P40692 756 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 CREMQ03060 361 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 PPM1LQ5SGD2 360 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-209ENST00000586799 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-209ENST00000586799 GAD1Q99259 594 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 ZMIZ1Q9ULJ6 1067 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 NDRG2Q9UN36 371 aaKnown RBP13.08□□□□□ -0.32
DNMT1-209ENST00000586799 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 CYP46A1Q9Y6A2 500 aa13.08□□□□□ -0.32
DNMT1-209ENST00000586799 CEP295Q9C0D2 2601 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 MSH4O15457 936 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 CHMP2AO43633 222 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 XYLBO75191 536 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-209ENST00000586799 ECI2O75521 394 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 C8AP07357 584 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 HOXA9P31269 272 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 SCNN1GP51170 649 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 CCR3P51677 355 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 JAK3P52333 1124 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 LIMK1P53667 647 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
DNMT1-209ENST00000586799 LIN9Q5TKA1 542 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-209ENST00000586799 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 GJA10Q969M2 543 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 CLSTN3Q9BQT9 956 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 MINDY3Q9H8M7 445 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 HCFC1R1Q9NWW0 138 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 ADAM28Q9UKQ2 775 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 IPPQ9Y573 584 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 ZFYVE26Q68DK2 2539 aa13.07□□□□□ -0.32
DNMT1-209ENST00000586799 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-209ENST00000586799 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 C1QTNF9BB2RNN3 333 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 MAN2B1O00754 1011 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 C1QTNF9P0C862 333 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 SCRN1Q12765 414 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 RTP2Q5QGT7 225 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 SRGAP1Q7Z6B7 1085 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 DAGLBQ8NCG7 672 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 ING5Q8WYH8 240 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 RIT2Q99578 217 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
DNMT1-209ENST00000586799 LMAN1LQ9HAT1 526 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
DNMT1-209ENST00000586799 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 HES2Q9Y543 173 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
DNMT1-209ENST00000586799 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 DDX11L8A8MPP1 907 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 GAS7O60861 476 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 DTNBO60941 627 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 PSMD10O75832 226 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 DEXIO95424 95 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 CYP3A7P24462 503 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 CNR2P34972 360 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 CXCL12P48061 93 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 FNTBP49356 437 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 USP11P51784 963 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 SATB1Q01826 763 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 AASDHQ4L235 1098 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-209ENST00000586799 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
DNMT1-209ENST00000586799 TANGO2Q6ICL3 276 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 POTEHQ6S545 545 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 UNQ6494/PRO21346Q6UXR6 183 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 TBCKQ8TEA7 893 aa13.05□□□□□ -0.32
DNMT1-209ENST00000586799 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms