RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 CHD4Q14839 1912 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 hCG_2014768A0A024R1R8 64 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 E9PMD0 336 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 GPC5P78333 572 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 DSG1Q02413 1049 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
ABR-218ENST00000572585 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 C11orf63Q6NUN7 778 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 KSR1Q8IVT5 923 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 ATL2Q8NHH9 583 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 TRAIPQ9BWF2 469 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 TRIM55Q9BYV6 548 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 DDX25Q9UHL0 483 aaKnown RBP12.49□□□□□ -0.41
ABR-218ENST00000572585 FOXO6A8MYZ6 492 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
ABR-218ENST00000572585 NR3C1P04150 777 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 PGM1P36871 562 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 TRIP13Q15645 432 aaPredicted RBP12.49□□□□□ -0.41
ABR-218ENST00000572585 SLCO1B3Q9NPD5 702 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 NDUFA13Q9P0J0 144 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 ANKFY1Q9P2R3 1169 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 LNPEPQ9UIQ6 1025 aa12.49□□□□□ -0.41
ABR-218ENST00000572585 PDXKO00764 312 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 COMTP21964 271 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ITGA8P53708 1063 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 AP2B1P63010 937 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 CETN1Q12798 172 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 MYBPC3Q14896 1274 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 KRT35Q92764 455 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ABTB1Q969K4 478 aaPredicted RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 FNBP1Q96RU3 617 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 KCTD10Q9H3F6 313 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 MYH2Q9UKX2 1941 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 A0A0G2JND7 137 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 A8MXQ7 604 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 CYTH3O43739 400 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 BCRP11274 1271 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 SERPINB3P29508 390 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 RFWD3Q6PCD5 774 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 IZUMO2Q6UXV1 221 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 MARK2Q7KZI7 788 aaKnown RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ERMNQ8TAM6 284 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 C1orf54Q8WWF1 131 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 GATA6Q92908 595 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 IFT43Q96FT9 208 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 NINJ2Q9NZG7 142 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ANKRD63C9JTQ0 380 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 C2CD2LO14523 706 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 TCEA3O75764 348 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 RXRBP28702 533 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 DZIP1Q86YF9 867 aaKnown RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 ZNF398Q8TD17 642 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 FAM161BQ96MY7 647 aa12.48□□□□□ -0.41
ABR-218ENST00000572585 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
ABR-218ENST00000572585 NPHP3-ACAD11A0A0J9YXS1 232 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 EXOC3O60645 756 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 GCNT3O95395 438 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 PDK4Q16654 411 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 ACSBG2Q5FVE4 666 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 TRIM42Q8IWZ5 723 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 FAM186BQ8IYM0 893 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 CCDC110Q8TBZ0 833 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 PIGSQ96S52 555 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 NAP1L4Q99733 375 aaKnown RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 PALM3A6NDB9 673 aaPredicted RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 MAGEB2O15479 319 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 GSC2O15499 205 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 SLC37A4O43826 429 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 TBX10O75333 385 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
ABR-218ENST00000572585 DLATP10515 647 aaKnown RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 ALAS1P13196 640 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 PSMC2P35998 433 aaKnown RBP12.47□□□□□ -0.41
ABR-218ENST00000572585 CDK7P50613 346 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 ARFIP2P53365 341 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 JAM2P57087 298 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 GIT2Q14161 759 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
ABR-218ENST00000572585 ANKLE1Q8NAG6 615 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms