RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
ABR-218ENST00000572585 HRCP23327 699 aa19.67■□□□□ 0.74
ABR-218ENST00000572585 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
ABR-218ENST00000572585 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
ABR-218ENST00000572585 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
ABR-218ENST00000572585 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
ABR-218ENST00000572585 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
ABR-218ENST00000572585 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
ABR-218ENST00000572585 MYT1Q01538 1121 aa18.86■□□□□ 0.61
ABR-218ENST00000572585 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
ABR-218ENST00000572585 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
ABR-218ENST00000572585 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
ABR-218ENST00000572585 TRIM26Q12899 539 aaPredicted RBP18.65■□□□□ 0.58
ABR-218ENST00000572585 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
ABR-218ENST00000572585 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
ABR-218ENST00000572585 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
ABR-218ENST00000572585 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
ABR-218ENST00000572585 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
ABR-218ENST00000572585 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
ABR-218ENST00000572585 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
ABR-218ENST00000572585 GTF3C3Q9Y5Q9 886 aa18.1■□□□□ 0.49
ABR-218ENST00000572585 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
ABR-218ENST00000572585 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
ABR-218ENST00000572585 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
ABR-218ENST00000572585 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
ABR-218ENST00000572585 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.45
ABR-218ENST00000572585 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
ABR-218ENST00000572585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
ABR-218ENST00000572585 YTHDC1Q96MU7 727 aaKnown RBP17.67■□□□□ 0.42
ABR-218ENST00000572585 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
ABR-218ENST00000572585 ABCC9O60706 1549 aa17.58■□□□□ 0.4
ABR-218ENST00000572585 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
ABR-218ENST00000572585 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
ABR-218ENST00000572585 MIER1Q8N108 512 aa17.33■□□□□ 0.36
ABR-218ENST00000572585 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
ABR-218ENST00000572585 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
ABR-218ENST00000572585 RSF1Q96T23 1441 aaPredicted RBP17.23■□□□□ 0.35
ABR-218ENST00000572585 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.34
ABR-218ENST00000572585 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
ABR-218ENST00000572585 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.32
ABR-218ENST00000572585 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
ABR-218ENST00000572585 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
ABR-218ENST00000572585 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.32
ABR-218ENST00000572585 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
ABR-218ENST00000572585 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
ABR-218ENST00000572585 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
ABR-218ENST00000572585 APLP2Q06481 763 aa16.94■□□□□ 0.3
ABR-218ENST00000572585 NEFLP07196 543 aa16.91■□□□□ 0.3
ABR-218ENST00000572585 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
ABR-218ENST00000572585 BCANQ96GW7 911 aa16.87■□□□□ 0.29
ABR-218ENST00000572585 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
ABR-218ENST00000572585 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
ABR-218ENST00000572585 FKBP8Q14318 412 aa16.79■□□□□ 0.28
ABR-218ENST00000572585 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
ABR-218ENST00000572585 EEA1Q15075 1411 aa16.71■□□□□ 0.26
ABR-218ENST00000572585 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
ABR-218ENST00000572585 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
ABR-218ENST00000572585 GOLGA3Q08378 1498 aa16.64■□□□□ 0.25
ABR-218ENST00000572585 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
ABR-218ENST00000572585 MROH2BQ7Z745 1585 aa16.62■□□□□ 0.25
ABR-218ENST00000572585 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
ABR-218ENST00000572585 SOGA1O94964 1423 aa16.61■□□□□ 0.25
ABR-218ENST00000572585 NACADO15069 1562 aa16.59■□□□□ 0.25
ABR-218ENST00000572585 CDK11AQ9UQ88 783 aaPredicted RBP16.57■□□□□ 0.24
ABR-218ENST00000572585 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
ABR-218ENST00000572585 ITGAEP38570 1179 aa16.55■□□□□ 0.24
ABR-218ENST00000572585 CLIP1P30622 1438 aa16.55■□□□□ 0.24
ABR-218ENST00000572585 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
ABR-218ENST00000572585 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
ABR-218ENST00000572585 WIZO95785 1651 aa16.51■□□□□ 0.23
ABR-218ENST00000572585 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
ABR-218ENST00000572585 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
ABR-218ENST00000572585 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
ABR-218ENST00000572585 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
ABR-218ENST00000572585 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
ABR-218ENST00000572585 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
ABR-218ENST00000572585 ANP32CO43423 234 aa16.45■□□□□ 0.22
ABR-218ENST00000572585 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
ABR-218ENST00000572585 MSH5O43196 834 aa16.42■□□□□ 0.22
ABR-218ENST00000572585 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
ABR-218ENST00000572585 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
ABR-218ENST00000572585 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
ABR-218ENST00000572585 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
ABR-218ENST00000572585 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
ABR-218ENST00000572585 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
ABR-218ENST00000572585 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
ABR-218ENST00000572585 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
ABR-218ENST00000572585 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
ABR-218ENST00000572585 NBR1Q14596 966 aa16.24■□□□□ 0.19
ABR-218ENST00000572585 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
ABR-218ENST00000572585 KIF21BO75037 1637 aa16.22■□□□□ 0.19
ABR-218ENST00000572585 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
ABR-218ENST00000572585 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
ABR-218ENST00000572585 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
ABR-218ENST00000572585 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
ABR-218ENST00000572585 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
ABR-218ENST00000572585 KANK4Q5T7N3 995 aaPredicted RBP16.18■□□□□ 0.18
ABR-218ENST00000572585 TIMELESSQ9UNS1 1208 aa16.17■□□□□ 0.18
ABR-218ENST00000572585 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
ABR-218ENST00000572585 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms