RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PDXKO00764 312 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 KIAA0391O15091 583 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 NPTXRO95502 500 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 PIGRP01833 764 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 CCDC192P0DO97 292 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 MCF2P10911 925 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 HARSP12081 509 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 RPL13P26373 211 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 KCNA1Q09470 495 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 RBM43Q6ZSC3 357 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 RNF169Q8NCN4 708 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 NOC3LQ8WTT2 800 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 PDZD7Q9H5P4 517 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 FAM105AQ9NUU6 356 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
USB1-215ENST00000569252 PCDHB2Q9Y5E7 798 aa17.5■□□□□ 0.39
USB1-215ENST00000569252 A0A0U1RQF3 1178 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 EOMESO95936 686 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 GARTP22102 1010 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
USB1-215ENST00000569252 DSC3Q14574 896 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 NOLC1Q14978 699 aaKnown RBP eCLIP17.49■□□□□ 0.39
USB1-215ENST00000569252 STX1AQ16623 288 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 CT47A1Q5JQC4 288 aaPredicted RBP17.49■□□□□ 0.39
USB1-215ENST00000569252 CDR2LQ86X02 465 aaPredicted RBP17.49■□□□□ 0.39
USB1-215ENST00000569252 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
USB1-215ENST00000569252 TRAIPQ9BWF2 469 aa17.49■□□□□ 0.39
USB1-215ENST00000569252 AGO2Q9UKV8 859 aaKnown RBP17.49■□□□□ 0.39
USB1-215ENST00000569252 ANKRD63C9JTQ0 380 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 MGEA5O60502 916 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 FGFR1OPO95684 399 aaKnown RBP17.48■□□□□ 0.39
USB1-215ENST00000569252 ITGA4P13612 1032 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 POU3F3P20264 500 aaPredicted RBP17.48■□□□□ 0.39
USB1-215ENST00000569252 MCL1Q07820 350 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 TPD52L1Q16890 204 aaPredicted RBP17.48■□□□□ 0.39
USB1-215ENST00000569252 THNSL1Q8IYQ7 743 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 ABI1Q8IZP0 508 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 ZBTB45Q96K62 511 aaPredicted RBP17.48■□□□□ 0.39
USB1-215ENST00000569252 ZBED2Q9BTP6 218 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 KIAA1586Q9HCI6 787 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 PARP2Q9UGN5 583 aa17.48■□□□□ 0.39
USB1-215ENST00000569252 SYCE3A1L190 88 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 CLIC2O15247 247 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 OGTO15294 1046 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 HOXA2O43364 376 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 ZNF623O75123 536 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 UPP2O95045 317 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 CCNE1P24864 410 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 FAM189BP81408 668 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 LRRC63Q05C16 580 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 PAK1Q13153 545 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 ZSCAN23Q3MJ62 389 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 RTN4RL1Q86UN2 441 aaPredicted RBP17.47■□□□□ 0.39
USB1-215ENST00000569252 ECHDC2Q86YB7 292 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 P2RX5Q93086 422 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 HLA-CQ95604 372 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 EIF2AQ9BY44 585 aaKnown RBP17.47■□□□□ 0.39
USB1-215ENST00000569252 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 ELAC1Q9H777 363 aaKnown RBP17.47■□□□□ 0.39
USB1-215ENST00000569252 PTPRHQ9HD43 1115 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 AGPAT3Q9NRZ7 376 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 FRMD4BQ9Y2L6 1034 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 IPPQ9Y573 584 aa17.47■□□□□ 0.39
USB1-215ENST00000569252 MUC6Q6W4X9 2439 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 A0A0B4J269 797 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 PPP1R3GB7ZBB8 358 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 C9IYK1 514 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 CETN3O15182 167 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 TGFB1I1O43294 461 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 EXOC3O60645 756 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 EDN1P05305 212 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 BMP6P22004 513 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 PROZP22891 400 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 HOXD13P35453 343 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 CYP2J2P51589 502 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 OSTNP61366 133 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 TYRO3Q06418 890 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 MYBPC2Q14324 1141 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 CENPPQ6IPU0 288 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
USB1-215ENST00000569252 NPAS4Q8IUM7 802 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 PHOSPHO2Q8TCD6 241 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
USB1-215ENST00000569252 CDT1Q9H211 546 aa17.46■□□□□ 0.39
USB1-215ENST00000569252 KCTD10Q9H3F6 313 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms