RNA–Protein interactions for RNA: ENST00000568653.7

RPGRIP1L-210, Transcript of RPGRIP1 like, humanhuman

TSL 1 (best) BASIC

Gene RPGRIP1L, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1L-210ENST00000568653 ZNF202O95125 648 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 ETV3P41162 512 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 TUBA3CQ13748 450 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 NTRK3Q16288 839 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 CCDC14Q49A88 953 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 C6orf89Q6UWU4 347 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 SGCDQ92629 289 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 ZNF75CPQ92670 426 aaPredicted RBP9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 SKA1Q96BD8 255 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 ZSCAN31Q96LW9 406 aaPredicted RBP9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 TPK1Q9H3S4 243 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 VAT1LQ9HCJ6 419 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 PFDN4Q9NQP4 134 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 LNPEPQ9UIQ6 1025 aa9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
RPGRIP1L-210ENST00000568653 H0Y3Z8 333 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PRPF3O43395 683 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ADCY3O60266 1144 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SNX2O60749 519 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 HMGCRP04035 888 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TYRO3Q06418 890 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 C3orf62Q6ZUJ4 267 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 VPS52Q8N1B4 723 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SCAIQ8N9R8 606 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 MRGBPQ9NV56 204 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 BAIAP2L1Q9UHR4 511 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 COBLO75128 1261 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 GRK4P32298 578 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 KRT9P35527 623 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 HSD17B4P51659 736 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SKOR1P84550 965 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 STIM1Q13586 685 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 COL13A1Q5TAT6 717 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FAM133AQ8N9E0 248 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 NCSTNQ92542 709 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CASP10Q92851 521 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CYP39A1Q9NYL5 469 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 IMPACTQ9P2X3 320 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FADS3Q9Y5Q0 445 aa9.64□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SYNGAP1Q96PV0 1343 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 NFIBO00712 420 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ADD1P35611 737 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 BNIP1Q12981 228 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CMPK2Q5EBM0 449 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 MAMDC4Q6UXC1 1216 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CAPN12Q6ZSI9 719 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 DPP9Q86TI2 863 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 P3H4Q92791 437 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FAM167BQ9BTA0 163 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CLSTN2Q9H4D0 955 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SUGCTQ9HAC7 445 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PARVBQ9HBI1 364 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SATB2Q9UPW6 733 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PCDHA1Q9Y5I3 950 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 B4GALT4O60513 344 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TACC1O75410 805 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 GSTA2P09210 222 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CYP2B6P20813 491 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ACADSBP45954 432 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 UBXN2AP68543 259 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 LACTB2Q53H82 288 aaPredicted RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 NXNQ6DKJ4 435 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 RNF207Q6ZRF8 634 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 IRGQQ8WZA9 623 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TRIB2Q92519 343 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 AZIN2Q96A70 460 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PSKH2Q96QS6 385 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 GLT8D2Q9H1C3 349 aa9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ADD3Q9UEY8 706 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FAM32AQ9Y421 112 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1L-210ENST00000568653 FRMPD4Q14CM0 1322 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TNFRSF10AO00220 468 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 PIK3CDO00329 1044 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 CPLX1O14810 134 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 OPLAHO14841 1288 aa9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 TAL1P17542 331 aaPredicted RBP9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 POLR2EP19388 210 aaKnown RBP9.62□□□□□ -0.87
RPGRIP1L-210ENST00000568653 DR1Q01658 176 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms