RNA–Protein interactions for RNA: ENST00000568059.1

NEIL1-218, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 4

Gene NEIL1, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-218ENST00000568059 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
NEIL1-218ENST00000568059 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
NEIL1-218ENST00000568059 BDP1A6H8Y1 2624 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 CASTOR2A6NHX0 329 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 SPDYE4A6NLX3 237 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 PTGESO14684 152 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 STX6O43752 255 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 THP07101 528 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 EPCAMP16422 314 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 HSP90AA2PQ14568 343 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 PTPAQ15257 358 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 KIAA1841Q6NSI8 718 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 FUT10Q6P4F1 479 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 SNX21Q969T3 373 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 ACO2Q99798 780 aaKnown RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 CCDC94Q9BW85 323 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 TARS2Q9BW92 718 aaKnown RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 PHF7Q9BWX1 381 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 LARSQ9P2J5 1176 aaKnown RBP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 CACNG4Q9UBN1 327 aa17.7■□□□□ 0.42
NEIL1-218ENST00000568059 SF3B1O75533 1304 aaKnown RBP eCLIP17.7■□□□□ 0.42
NEIL1-218ENST00000568059 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 H0YCG3 227 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 KRT18P05783 430 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 ALADP13716 330 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 KLRC2P26717 231 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 MARCKSP29966 332 aaPredicted RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 GRM5P41594 1212 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 ITIH3Q06033 890 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 CES5AQ6NT32 575 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 CEP120Q8N960 986 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 LARP4BQ92615 738 aaKnown RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 RAD54LQ92698 747 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 KLHL5Q96PQ7 755 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 REEP2Q9BRK0 252 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 S1PR5Q9H228 398 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
NEIL1-218ENST00000568059 BLOC1S4Q9NUP1 217 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 ANKFY1Q9P2R3 1169 aa17.69■□□□□ 0.42
NEIL1-218ENST00000568059 CITO14578 2027 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 DCXO43602 365 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
NEIL1-218ENST00000568059 FAM13AO94988 1023 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 KIF4AO95239 1232 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 ADH1AP07327 375 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 MCF2P10911 925 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 HARSP12081 509 aaKnown RBP17.68■□□□□ 0.42
NEIL1-218ENST00000568059 TXLNAP40222 546 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 DSG1Q02413 1049 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 MCM6Q14566 821 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 GLRA4Q5JXX5 417 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 RARS2Q5T160 578 aaKnown RBP17.68■□□□□ 0.42
NEIL1-218ENST00000568059 MPZL3Q6UWV2 235 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 TAS1R1Q7RTX1 841 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 ZBTB33Q86T24 672 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 TMEM161BQ8NDZ6 487 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 HASPINQ8TF76 798 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 PAAF1Q9BRP4 392 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 NTPCRQ9BSD7 190 aaKnown RBP17.68■□□□□ 0.42
NEIL1-218ENST00000568059 TCHPQ9BT92 498 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 CCSER1Q9C0I3 900 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 SFXN1Q9H9B4 322 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 PTPRHQ9HD43 1115 aa17.68■□□□□ 0.42
NEIL1-218ENST00000568059 FBXO2Q9UK22 296 aaPredicted RBP17.68■□□□□ 0.42
NEIL1-218ENST00000568059 K7ENM7 598 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 TADA2AO75478 443 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 EFEMP2O95967 443 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
NEIL1-218ENST00000568059 PROZP22891 400 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 CLCN4P51793 760 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 OSTNP61366 133 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
NEIL1-218ENST00000568059 USP41Q3LFD5 358 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 TMEM31Q5JXX7 168 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 SPECC1Q5M775 1068 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 BICD1Q96G01 975 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 EPSTI1Q96J88 318 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 FBXL18Q96ME1 805 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 NECTIN4Q96NY8 510 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
NEIL1-218ENST00000568059 CXCL16Q9H2A7 254 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms