RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 MIOSQ9NXC5 875 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 CNOT1A5YKK6 2376 aaKnown RBP15.03■□□□□ -0
CCDC59-202ENST00000547758 DCDC2BA2VCK2 349 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 LILRB5O75023 590 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 ERLIN2O94905 339 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 TDP2O95551 362 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 NPEPPSP55786 919 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 FGD1P98174 961 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 PFKPQ01813 784 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 AKAP17AQ02040 695 aaKnown RBP15.03■□□□□ -0
CCDC59-202ENST00000547758 LAMTOR4Q0VGL1 99 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 ST3GAL2Q16842 350 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 TMEM92Q6UXU6 159 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 EXOC8Q8IYI6 725 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 NELL1Q92832 810 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 FGF13Q92913 245 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 DHX33Q9H6R0 707 aaKnown RBP15.03■□□□□ -0
CCDC59-202ENST00000547758 VPS54Q9P1Q0 977 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 FBXW11Q9UKB1 542 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 ADAM28Q9UKQ2 775 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 USP18Q9UMW8 372 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 HES2Q9Y543 173 aa15.03■□□□□ -0
CCDC59-202ENST00000547758 CYP3A7-CYP3A51PA0A087WV96 503 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 CD72P21854 359 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 CYP3A7P24462 503 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 AXLP30530 894 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 NTHL1P78549 312 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 TSGA10IPQ3SY00 556 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 ZBTB41Q5SVQ8 909 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 NOTUMQ6P988 496 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 RNF149Q8NC42 400 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 ETNPPLQ8TBG4 499 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 CCDC51Q96ER9 411 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 CEP170P1Q96L14 293 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 APOL6Q9BWW8 343 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 GIT1Q9Y2X7 761 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 PPME1Q9Y570 386 aa15.02■□□□□ -0
CCDC59-202ENST00000547758 TBC1D4O60343 1298 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TSPAN1O60635 241 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 ADRB1P08588 477 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 HMGB1P09429 215 aaKnown RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 HNRNPA1P09651 372 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TGM1P22735 817 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TARSP26639 723 aaKnown RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 RFC5P40937 340 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 QARSP47897 775 aaKnown RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 KRT32Q14532 448 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 PCBP1Q15365 356 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 LIN9Q5TKA1 542 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TSSK4Q6SA08 328 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 PRSS55Q6UWB4 352 aaPredicted RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 FERMT3Q86UX7 667 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TCP11Q8WWU5 503 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 CLDN23Q96B33 292 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 CPB2Q96IY4 423 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 KXD1Q9BQD3 176 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 PHF20Q9BVI0 1012 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 RNF26Q9BY78 433 aaPredicted RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 PRMT8Q9NR22 394 aaPredicted RBP15.01□□□□□ -0.01
CCDC59-202ENST00000547758 GMEB2Q9UKD1 530 aa15.01□□□□□ -0.01
CCDC59-202ENST00000547758 TRIP11Q15643 1979 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 SF3B1O75533 1304 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC59-202ENST00000547758 EML1O00423 815 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 ASAP2O43150 1006 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 DKC1O60832 514 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC59-202ENST00000547758 C8AP07357 584 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 HOXA9P31269 272 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 RPS9P46781 194 aaKnown RBP15□□□□□ -0.01
CCDC59-202ENST00000547758 NLRP5P59047 1200 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 GRIK3Q13003 919 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 EMC2Q15006 297 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 NTRK3Q16288 839 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 RTP2Q5QGT7 225 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 PPM1LQ5SGD2 360 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 TPRG1Q6ZUI0 275 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 HACE1Q8IYU2 909 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 GSTCDQ8NEC7 633 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 ITFG1Q8TB96 612 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 RABGGTAQ92696 567 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 SLC26A6Q9BXS9 759 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 TRIM6Q9C030 488 aaPredicted RBP15□□□□□ -0.01
CCDC59-202ENST00000547758 CSRNP2Q9H175 543 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 NXF3Q9H4D5 531 aaKnown RBP15□□□□□ -0.01
CCDC59-202ENST00000547758 PARD6AQ9NPB6 346 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 SH3GLB2Q9NR46 395 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 WRAP73Q9P2S5 460 aaPredicted RBP15□□□□□ -0.01
CCDC59-202ENST00000547758 POLIQ9UNA4 740 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 TICRRQ7Z2Z1 1910 aa15□□□□□ -0.01
CCDC59-202ENST00000547758 NCAM2O15394 837 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 CCL16O15467 120 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 XYLBO75191 536 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 TADA2AO75478 443 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 NCBP1Q09161 790 aaKnown RBP14.99□□□□□ -0.01
CCDC59-202ENST00000547758 PPP2R5CQ13362 524 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 MOXD1Q6UVY6 613 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 Q6ZUG5 572 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 BRF1Q92994 677 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 NELL2Q99435 816 aa14.99□□□□□ -0.01
CCDC59-202ENST00000547758 CLSTN3Q9BQT9 956 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms