RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 PCDHB18PQ96TA0 734 aa15.68■□□□□ 0.1
LETMD1-209ENST00000547318 EPB41L4BQ9H329 900 aa15.68■□□□□ 0.1
LETMD1-209ENST00000547318 FBXO28Q9NVF7 368 aa15.68■□□□□ 0.1
LETMD1-209ENST00000547318 COL20A1Q9P218 1284 aa15.68■□□□□ 0.1
LETMD1-209ENST00000547318 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.68■□□□□ 0.1
LETMD1-209ENST00000547318 CAPN7Q9Y6W3 813 aa15.68■□□□□ 0.1
LETMD1-209ENST00000547318 ANKRD65E5RJM6 399 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 FSCN2O14926 492 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 RGS16O15492 202 aaPredicted RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 ASAP2O43150 1006 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 CALCOCO2Q13137 446 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 PGM5Q15124 567 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 SWT1Q5T5J6 900 aaKnown RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 KRT35Q92764 455 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 C18orf8Q96DM3 657 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 ZBED3Q96IU2 234 aaPredicted RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 TRIM31Q9BZY9 425 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 RAB20Q9NX57 234 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 SNX24Q9Y343 169 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 NFIBO00712 420 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 SLC16A4O15374 487 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 ADRB2P07550 413 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 CHRNA5P30532 468 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 RPL21P46778 160 aaKnown RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 CLEC16AQ2KHT3 1053 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 XKR9Q5GH70 373 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 TNFAIP8L3Q5GJ75 292 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 CCDC50Q8IVM0 306 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 CCDC105Q8IYK2 499 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 PLEKHO2Q8TD55 490 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 GLG1Q92896 1179 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 ATP6V0A1Q93050 837 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 NSRP1Q9H0G5 558 aaKnown RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 RABEP2Q9H5N1 569 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 KMT5AQ9NQR1 393 aa15.67■□□□□ 0.1
LETMD1-209ENST00000547318 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
LETMD1-209ENST00000547318 BACH1O14867 736 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CYP26A1O43174 497 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 ZBED4O75132 1171 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 ITIH2P19823 946 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CNGA1P29973 690 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 HSPA1LP34931 641 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 TNFAIP1Q13829 316 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 ITIH4Q14624 930 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 ZYXQ15942 572 aaKnown RBP15.66■□□□□ 0.1
LETMD1-209ENST00000547318 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 TRIM72Q6ZMU5 477 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CPLX4Q7Z7G2 160 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 NLRX1Q86UT6 975 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 BBOF1Q8ND07 529 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 IL31RAQ8NI17 732 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 SEC16BQ96JE7 1060 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 ZNF341Q9BYN7 854 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 KDM4CQ9H3R0 1056 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 VEZTQ9HBM0 779 aa15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CTDP1Q9Y5B0 961 aaPredicted RBP15.66■□□□□ 0.1
LETMD1-209ENST00000547318 CAND2O75155 1236 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 STAM2O75886 525 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 PYGMP11217 842 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 CCND2P30279 289 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 NPTX2P47972 431 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 MAP2K1Q02750 393 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 CENPCQ03188 943 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 CYP24A1Q07973 514 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 IFT88Q13099 833 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 FAM102BQ5T8I3 360 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 RNF187Q5TA31 235 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 MAEAQ7L5Y9 396 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 DDX1Q92499 740 aaKnown RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 CDHR1Q96JP9 859 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 PDCD2LQ9BRP1 358 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 PCDHA10Q9Y5I2 948 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 ARID2Q68CP9 1835 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 RIPK2O43353 540 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 MMEP08473 750 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 SIX1Q15475 284 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 TTC27Q6P3X3 843 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 RNF207Q6ZRF8 634 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 MIGA2Q7L4E1 593 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 SLC47A2Q86VL8 602 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 PSPC1Q8WXF1 523 aaKnown RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 RNF25Q96BH1 459 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 SERPINB12Q96P63 405 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 FOXP3Q9BZS1 431 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 A1CFQ9NQ94 594 aaKnown RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 PXMP2Q9NR77 195 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 C1orf112Q9NSG2 853 aa15.65■□□□□ 0.1
LETMD1-209ENST00000547318 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
LETMD1-209ENST00000547318 NFASCO94856 1347 aa15.64■□□□□ 0.09
LETMD1-209ENST00000547318 DENND3A2RUS2 1198 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms