RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DACH2Q96NX9 599 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 GOLPH3LQ9H4A5 285 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 EN1Q05925 392 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 LMBRD2Q68DH5 695 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 ZC3H18Q86VM9 953 aaKnown RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 ABTB1Q969K4 478 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 FAM84BQ96KN1 310 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 OSBPL9Q96SU4 736 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 SYNDIG1Q9H7V2 258 aa19.21■□□□□ 0.67
SFSWAP-203ENST00000535236 PIK3R2O00459 728 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 WASHC5Q12768 1159 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 SYTL3Q4VX76 610 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 GLYCTKQ8IVS8 523 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 BPIFA3Q9BQP9 254 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 TIPINQ9BVW5 301 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 TSSK1BQ9BXA7 367 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 AGAP1Q9UPQ3 857 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 CLCA2Q9UQC9 943 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 FAM187AA6NFU0 413 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 MAGOHP61326 146 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 NFIXQ14938 502 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 WDR72Q3MJ13 1102 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 NFRKBQ6P4R8 1299 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 CCDC137Q6PK04 289 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 RGS9BPQ6ZS82 235 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 MFN1Q8IWA4 741 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 CDV3Q9UKY7 258 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 ZNRF3Q9ULT6 936 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 ZSCAN9O15535 394 aaPredicted RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 GGPS1O95749 300 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 SYF2O95926 243 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 KCNA4P22459 653 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 ARFIP2P53365 341 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 PDCLQ13371 301 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 IZUMO3Q5VZ72 239 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 FRMD5Q7Z6J6 570 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 EML4Q9HC35 981 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 SENP1Q9P0U3 644 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 DCTN4Q9UJW0 460 aa19.2■□□□□ 0.66
SFSWAP-203ENST00000535236 MYCBPQ99417 103 aaPredicted RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 DDX47Q9H0S4 455 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 CTSHP09668 335 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 ACTR2P61160 394 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 OCA2Q04671 838 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 KDELC2Q7Z4H8 507 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 DYNC1LI2O43237 492 aaPredicted RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 BRAFP15056 766 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 RBP5P82980 135 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 C1orf54Q8WWF1 131 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 RFFLQ8WZ73 363 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 AGPAT1Q99943 283 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 MAP4P27816 1152 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 TKFCQ3LXA3 575 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 CCDC90BQ9GZT6 254 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 MLXIPLQ9NP71 852 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 EFCAB14O75071 495 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 CHRNA5P30532 468 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 BEND6Q5SZJ8 279 aaPredicted RBP19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 PGBD3Q8N328 593 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 SMARCAD1Q9H4L7 1026 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 SLC4A7Q9Y6M7 1214 aa19.19■□□□□ 0.66
SFSWAP-203ENST00000535236 C6orf222P0C671 652 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 RARBP10826 455 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 HLA-DPA1P20036 260 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 EIF3EP60228 445 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 ARID5BQ14865 1188 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 TEX13BQ9BXU2 312 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 SPATS2LQ9NUQ6 558 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 H0Y3Z8 333 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 TMED1Q13445 227 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 STILQ15468 1287 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 PARK7Q99497 189 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 CNOT7Q9UIV1 285 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 SNX17Q15036 470 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 FMR1NBQ8N0W7 255 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 STAG2Q8N3U4 1231 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 GJD4Q96KN9 370 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 NDE1Q9NXR1 346 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 SNX9Q9Y5X1 595 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 STXBP3O00186 592 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 CYP26A1O43174 497 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 HIST1H2AGP0C0S8 130 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 HIST1H2ADP20671 130 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 NMT1P30419 496 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 ARL4DP49703 201 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 ARSEP51690 589 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 SEMA3FQ13275 785 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 MAPRE2Q15555 327 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 MEI1Q5TIA1 1274 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 ATXN7L3BQ96GX2 97 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 HIST1H2AHQ96KK5 128 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 HIST1H2AJQ99878 128 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 H2AFJQ9BTM1 129 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 RUBCNLQ9H714 662 aa19.18■□□□□ 0.66
SFSWAP-203ENST00000535236 SPON1Q9HCB6 807 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms