RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 FGD4Q96M96 766 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 FAM20AQ96MK3 541 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 ZNF396Q96N95 335 aaPredicted RBP6.66□□□□□ -1.34
FAM49B-218ENST00000520887 RIT2Q99578 217 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 KRTAP4-12Q9BQ66 201 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 SENP6Q9GZR1 1112 aaPredicted RBP6.66□□□□□ -1.34
FAM49B-218ENST00000520887 SEMA6CQ9H3T2 930 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 GSX1Q9H4S2 264 aaPredicted RBP6.66□□□□□ -1.34
FAM49B-218ENST00000520887 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 KCNH7Q9NS40 1196 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 FAM105AQ9NUU6 356 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 UBIAD1Q9Y5Z9 338 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 ELP1O95163 1332 aa6.66□□□□□ -1.34
FAM49B-218ENST00000520887 BTBD18B2RXH4 712 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 M0QZ92 97 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 DDX39AO00148 427 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 STX6O43752 255 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 PPFIA4O75335 1185 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 ASGR1P07306 291 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 MMP3P08254 477 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 OR52Z1P0C646 297 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 FDPSP14324 419 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 CIITAP33076 1130 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 MCM7P33993 719 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 NUCB2P80303 420 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 CYP27A1Q02318 531 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 LY6KQ17RY6 165 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 Q4G0T1 1027 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 UTP14CQ5TAP6 766 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 PPP4R3AQ6IN85 833 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 ZNF746Q6NUN9 644 aaPredicted RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 TAPT1Q6NXT6 567 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 CYFIP1Q7L576 1253 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 RSPH3Q86UC2 560 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 EXOC8Q8IYI6 725 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 IL31RAQ8NI17 732 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 EPS8L3Q8TE67 593 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 AFG1LQ8WV93 481 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 DPF3Q92784 378 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 CCDC34Q96HJ3 373 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 CDK5RAP3Q96JB5 506 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 LBHD1Q9BQE6 289 aaPredicted RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 JPH2Q9BR39 696 aaPredicted RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 UPF3AQ9H1J1 476 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 SMARCAD1Q9H4L7 1026 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 PDGFCQ9NRA1 345 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 ERAP1Q9NZ08 941 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 DDX41Q9UJV9 622 aaKnown RBP6.65□□□□□ -1.34
FAM49B-218ENST00000520887 LCTP09848 1927 aa6.65□□□□□ -1.34
FAM49B-218ENST00000520887 SMCHD1A6NHR9 2005 aa6.65□□□□□ -1.35
FAM49B-218ENST00000520887 MYH7BA7E2Y1 1941 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 A0A1W2PQ45 241 aaPredicted RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 A0A1W2PQY0 241 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 MEIS1O00470 390 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 CHMP2AO43633 222 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 NCLP19338 710 aaKnown RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 EN2P19622 333 aaPredicted RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 TCF7P36402 384 aaPredicted RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 TXKP42681 527 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 ACLYP53396 1101 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 MRPS9P82933 396 aaKnown RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 CAP1Q01518 475 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 GRM2Q14416 872 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 KCNA10Q16322 511 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 GLIS3Q8NEA6 775 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 TRPV1Q8NER1 839 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 PAWRQ96IZ0 340 aaKnown RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 KATNBL1Q9H079 304 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 AGO4Q9HCK5 861 aaKnown RBP6.64□□□□□ -1.35
FAM49B-218ENST00000520887 ZNF302Q9NR11 478 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 CCDC39Q9UFE4 941 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 CFAP45Q9UL16 551 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 PCDHA12Q9UN75 941 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 ATP11BQ9Y2G3 1177 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 PCDHA10Q9Y5I2 948 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 ASTN1O14525 1302 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 KDM3AQ9Y4C1 1321 aa6.64□□□□□ -1.35
FAM49B-218ENST00000520887 CYP3A7-CYP3A51PA0A087WV96 503 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 C17orf102A2RUQ5 167 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 RRN3P2A6NIE6 340 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 SORBS3O60504 671 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 TDP2O95551 362 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 PRNPP04156 253 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 LGALS2P05162 132 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 ITGB5P18084 799 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 LIG1P18858 919 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 SYT1P21579 422 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 CYP3A7P24462 503 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 U2AF2P26368 475 aaKnown RBP eCLIP6.63□□□□□ -1.35
FAM49B-218ENST00000520887 TMOD1P28289 359 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 STAT5BP51692 787 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 ACTR2P61160 394 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 BEX3Q00994 111 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 ARHGAP1Q07960 439 aa6.63□□□□□ -1.35
FAM49B-218ENST00000520887 FAAP100Q0VG06 881 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms