RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
FAM49B-218ENST00000520887 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
FAM49B-218ENST00000520887 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
FAM49B-218ENST00000520887 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
FAM49B-218ENST00000520887 FOXD1Q16676 465 aa18.58■□□□□ 0.56
FAM49B-218ENST00000520887 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
FAM49B-218ENST00000520887 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
FAM49B-218ENST00000520887 ADRA2BP18089 450 aa17.51■□□□□ 0.39
FAM49B-218ENST00000520887 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
FAM49B-218ENST00000520887 MSH5O43196 834 aa17.32■□□□□ 0.36
FAM49B-218ENST00000520887 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
FAM49B-218ENST00000520887 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
FAM49B-218ENST00000520887 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
FAM49B-218ENST00000520887 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
FAM49B-218ENST00000520887 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
FAM49B-218ENST00000520887 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
FAM49B-218ENST00000520887 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
FAM49B-218ENST00000520887 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
FAM49B-218ENST00000520887 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
FAM49B-218ENST00000520887 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
FAM49B-218ENST00000520887 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
FAM49B-218ENST00000520887 KCNA4P22459 653 aa14.99□□□□□ -0.01
FAM49B-218ENST00000520887 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
FAM49B-218ENST00000520887 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
FAM49B-218ENST00000520887 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
FAM49B-218ENST00000520887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
FAM49B-218ENST00000520887 C1QBPQ07021 282 aaKnown RBP14.61□□□□□ -0.07
FAM49B-218ENST00000520887 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
FAM49B-218ENST00000520887 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
FAM49B-218ENST00000520887 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
FAM49B-218ENST00000520887 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
FAM49B-218ENST00000520887 CAPN15O75808 1086 aa14.08□□□□□ -0.16
FAM49B-218ENST00000520887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
FAM49B-218ENST00000520887 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
FAM49B-218ENST00000520887 APLP2Q06481 763 aa14.02□□□□□ -0.17
FAM49B-218ENST00000520887 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
FAM49B-218ENST00000520887 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
FAM49B-218ENST00000520887 DSG3P32926 999 aa13.93□□□□□ -0.18
FAM49B-218ENST00000520887 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
FAM49B-218ENST00000520887 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
FAM49B-218ENST00000520887 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
FAM49B-218ENST00000520887 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
FAM49B-218ENST00000520887 ZBTB22O15209 634 aa13.76□□□□□ -0.21
FAM49B-218ENST00000520887 ABCB7O75027 752 aa13.75□□□□□ -0.21
FAM49B-218ENST00000520887 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
FAM49B-218ENST00000520887 POLA2Q14181 598 aa13.58□□□□□ -0.24
FAM49B-218ENST00000520887 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
FAM49B-218ENST00000520887 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
FAM49B-218ENST00000520887 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
FAM49B-218ENST00000520887 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
FAM49B-218ENST00000520887 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
FAM49B-218ENST00000520887 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
FAM49B-218ENST00000520887 FBLN2P98095 1184 aa13.09□□□□□ -0.31
FAM49B-218ENST00000520887 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
FAM49B-218ENST00000520887 POTEHQ6S545 545 aa13□□□□□ -0.33
FAM49B-218ENST00000520887 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
FAM49B-218ENST00000520887 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
FAM49B-218ENST00000520887 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
FAM49B-218ENST00000520887 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
FAM49B-218ENST00000520887 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
FAM49B-218ENST00000520887 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
FAM49B-218ENST00000520887 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
FAM49B-218ENST00000520887 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
FAM49B-218ENST00000520887 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
FAM49B-218ENST00000520887 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
FAM49B-218ENST00000520887 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
FAM49B-218ENST00000520887 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
FAM49B-218ENST00000520887 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
FAM49B-218ENST00000520887 FXR2P51116 673 aaKnown RBP eCLIP12.61□□□□□ -0.39
FAM49B-218ENST00000520887 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
FAM49B-218ENST00000520887 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
FAM49B-218ENST00000520887 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
FAM49B-218ENST00000520887 HAX1O00165 279 aa12.39□□□□□ -0.43
FAM49B-218ENST00000520887 CCDC180Q9P1Z9 1646 aa12.37□□□□□ -0.43
FAM49B-218ENST00000520887 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
FAM49B-218ENST00000520887 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
FAM49B-218ENST00000520887 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
FAM49B-218ENST00000520887 EVX2Q03828 476 aa12.22□□□□□ -0.45
FAM49B-218ENST00000520887 PROM2Q8N271 834 aa12.21□□□□□ -0.45
FAM49B-218ENST00000520887 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
FAM49B-218ENST00000520887 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
FAM49B-218ENST00000520887 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
FAM49B-218ENST00000520887 FKBP8Q14318 412 aa12.11□□□□□ -0.47
FAM49B-218ENST00000520887 CD44P16070 742 aaKnown RBP12.06□□□□□ -0.48
FAM49B-218ENST00000520887 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
FAM49B-218ENST00000520887 MNX1P50219 401 aaPredicted RBP11.98□□□□□ -0.49
FAM49B-218ENST00000520887 GABBR2O75899 941 aa11.97□□□□□ -0.49
FAM49B-218ENST00000520887 MIER1Q8N108 512 aa11.94□□□□□ -0.5
FAM49B-218ENST00000520887 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
FAM49B-218ENST00000520887 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
FAM49B-218ENST00000520887 ABCC9O60706 1549 aa11.91□□□□□ -0.5
FAM49B-218ENST00000520887 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
FAM49B-218ENST00000520887 CLCN6P51797 869 aa11.88□□□□□ -0.51
FAM49B-218ENST00000520887 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
FAM49B-218ENST00000520887 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
FAM49B-218ENST00000520887 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
FAM49B-218ENST00000520887 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
FAM49B-218ENST00000520887 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
FAM49B-218ENST00000520887 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
FAM49B-218ENST00000520887 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms