RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TPRNQ4KMQ1 711 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 TAS1R3Q7RTX0 852 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 RAD54LQ92698 747 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
USP39-217ENST00000491659 CCSER1Q9C0I3 900 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 CD320Q9NPF0 282 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 MRPL17Q9NRX2 175 aaKnown RBP16.57■□□□□ 0.24
USP39-217ENST00000491659 CCDC39Q9UFE4 941 aa16.57■□□□□ 0.24
USP39-217ENST00000491659 FBXO2Q9UK22 296 aaPredicted RBP16.57■□□□□ 0.24
USP39-217ENST00000491659 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 PTGESO14684 152 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 FAM13AO94988 1023 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 THP07101 528 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 YARSP54577 528 aaKnown RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 HSP90AA2PQ14568 343 aaPredicted RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 LARP4BQ92615 738 aaKnown RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 REEP2Q9BRK0 252 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 NTPCRQ9BSD7 190 aaKnown RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 CCDC94Q9BW85 323 aaPredicted RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 TARS2Q9BW92 718 aaKnown RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 CDT1Q9H211 546 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 TOPORSQ9NS56 1045 aaPredicted RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 BLOC1S4Q9NUP1 217 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 DZANK1Q9NVP4 752 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 ADAM28Q9UKQ2 775 aa16.56■□□□□ 0.24
USP39-217ENST00000491659 SRPRBQ9Y5M8 271 aaKnown RBP16.56■□□□□ 0.24
USP39-217ENST00000491659 PLXNA3P51805 1871 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 PDCD11Q14690 1871 aaKnown RBP16.55■□□□□ 0.24
USP39-217ENST00000491659 CASTOR2A6NHX0 329 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 C2CD2LO14523 706 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
USP39-217ENST00000491659 MCF2P10911 925 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 GRM5P41594 1212 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 MCM6Q14566 821 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 SPECC1Q5M775 1068 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 FUT10Q6P4F1 479 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 SYCE2Q6PIF2 218 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 MPZL3Q6UWV2 235 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 ZBTB33Q86T24 672 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 RNF168Q8IYW5 571 aaPredicted RBP16.55■□□□□ 0.24
USP39-217ENST00000491659 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 EPSTI1Q96J88 318 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 TCHPQ9BT92 498 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 APOL5Q9BWW9 433 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 C1QTNF1Q9BXJ1 281 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 ANKFY1Q9P2R3 1169 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
USP39-217ENST00000491659 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.243e-9■■■■■ 206.8
USP39-217ENST00000491659 SPDYE4A6NLX3 237 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 F8W810 466 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 TADA2AO75478 443 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 HARSP12081 509 aaKnown RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 PDIA4P13667 645 aaKnown RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 EPCAMP16422 314 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 SCP2P22307 547 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 KLRC2P26717 231 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 NCKAP1LP55160 1127 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 CBX2Q14781 532 aaPredicted RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 STK38Q15208 465 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 CES5AQ6NT32 575 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 CEP120Q8N960 986 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 KRI1Q8N9T8 703 aaKnown RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 SUSD6Q92537 303 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 BICD1Q96G01 975 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 ZNF396Q96N95 335 aaPredicted RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 CLIC6Q96NY7 704 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 KLHL5Q96PQ7 755 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 ZHX3Q9H4I2 956 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 PTPRHQ9HD43 1115 aa16.54■□□□□ 0.24
USP39-217ENST00000491659 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
USP39-217ENST00000491659 MUC3AQ02505 3323 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 K7ENM7 598 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 TOM1L1O75674 476 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 EFEMP2O95967 443 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 ADH1AP07327 375 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 CNPP09543 421 aaKnown RBP16.53■□□□□ 0.24
USP39-217ENST00000491659 PROZP22891 400 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP39-217ENST00000491659 ZNF131P52739 623 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 OSTNP61366 133 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 DSG1Q02413 1049 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 ITIH3Q06033 890 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP39-217ENST00000491659 SLC39A14Q15043 492 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 GLRA4Q5JXX5 417 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 ZPBP2Q6X784 338 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 SLC22A17Q8WUG5 538 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 RABGGTAQ92696 567 aa16.53■□□□□ 0.24
USP39-217ENST00000491659 PHF7Q9BWX1 381 aaPredicted RBP16.53■□□□□ 0.24
USP39-217ENST00000491659 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms