RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 CNPY1Q3B7I2 92 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 PABPC1LQ4VXU2 614 aaKnown RBP11.37□□□□□ -0.59
CCDC171-208ENST00000486641 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 ANKRD35Q8N283 1001 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 C1orf54Q8WWF1 131 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 ZFP69BQ9UJL9 534 aa11.37□□□□□ -0.59
CCDC171-208ENST00000486641 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 CDH16O75309 829 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 UBTFL6P0CB48 400 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 IVDP26440 423 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ITGA8P53708 1063 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 CDR2Q01850 454 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 MCL1Q07820 350 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 KCNA1Q09470 495 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 KPNB1Q14974 876 aaKnown RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 TRIP13Q15645 432 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 UBE2SQ16763 222 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 RASIP1Q5U651 963 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 HHATQ5VTY9 493 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 MTDHQ86UE4 582 aaKnown RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 SFR1Q86XK3 245 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 KSR1Q8IVT5 923 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 DTX3LQ8TDB6 740 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 DENND1AQ8TEH3 1009 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 OPTNQ96CV9 577 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 LRRC19Q9H756 370 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ZWILCHQ9H900 591 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 PDP2Q9P2J9 529 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ASIC3Q9UHC3 531 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 PHF24Q9UPV7 400 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ACTL7BQ9Y614 415 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 SHANK3Q9BYB0 1731 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ASTN1O14525 1302 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 MED24O75448 989 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 PSMG1O95456 288 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 FTLP02792 175 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ZCCHC18P0CG32 403 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 DLATP10515 647 aaKnown RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 RFC4P35249 363 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 AP1B1Q10567 949 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 TMED2Q15363 201 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 KBTBD2Q8IY47 623 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-208ENST00000486641 CFAP61Q8NHU2 1237 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 MAML1Q92585 1016 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
CCDC171-208ENST00000486641 ROBO3Q96MS0 1386 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 GSC2O15499 205 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SCNN1BP51168 640 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 PSMC6P62333 389 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 WDR72Q3MJ13 1102 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 NLRP9Q7RTR0 991 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SLC20A1Q8WUM9 679 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 CD101Q93033 1021 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SNF8Q96H20 258 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 AGPAT1Q99943 283 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 WNT8AQ9H1J5 351 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SAR1AQ9NR31 198 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 KRT82Q9NSB4 513 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 FOXN3O00409 490 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
CCDC171-208ENST00000486641 LYNP07948 512 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 MUTP22033 750 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 RPL13P26373 211 aaKnown RBP11.35□□□□□ -0.59
CCDC171-208ENST00000486641 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
CCDC171-208ENST00000486641 STAT3P40763 770 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SPDYAQ5MJ70 313 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 RGS9BPQ6ZS82 235 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 CLNKQ7Z7G1 428 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 WDR60Q8WVS4 1066 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 NCSTNQ92542 709 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 BTBD10Q9BSF8 475 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 SPATA16Q9BXB7 569 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 UBN1Q9NPG3 1134 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 TYW1Q9NV66 732 aaKnown RBP11.35□□□□□ -0.59
CCDC171-208ENST00000486641 ATXN10Q9UBB4 475 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 FRMPD4Q14CM0 1322 aa11.35□□□□□ -0.59
CCDC171-208ENST00000486641 CLDN3O15551 220 aa11.34□□□□□ -0.59
CCDC171-208ENST00000486641 MAP3K7O43318 606 aa11.34□□□□□ -0.59
CCDC171-208ENST00000486641 EXOC3O60645 756 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms