RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CHST7Q9NS84 486 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 MUTYHQ9UIF7 546 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 ODF2LQ9ULJ1 636 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 HES2Q9Y543 173 aa12.59□□□□□ -0.39
CCM2-213ENST00000480658 VWA3AA6NCI4 1184 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 TMEM189-UBE2V1I3L0A0 370 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 RBAK-RBAKDNI3L0D1 243 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 RECQL4O94761 1208 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 MCF2P10911 925 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 AKAP5P24588 427 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 TXLNAP40222 546 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 UBA7P41226 1012 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 NPTX2P47972 431 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 NUBP1P53384 320 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 PEX3P56589 373 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 SIGLEC14Q08ET2 396 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 NBR1Q14596 966 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 FUT10Q6P4F1 479 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 BMP8AQ7Z5Y6 402 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 ZDHHC14Q8IZN3 488 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 SLC22A17Q8WUG5 538 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 KCNN1Q92952 543 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
CCM2-213ENST00000480658 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.4
CCM2-213ENST00000480658 NTPCRQ9BSD7 190 aaKnown RBP12.58□□□□□ -0.4
CCM2-213ENST00000480658 MARCH5Q9NX47 278 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 ZDHHC7Q9NXF8 308 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 ARHGAP28Q9P2N2 729 aa12.58□□□□□ -0.4
CCM2-213ENST00000480658 TDRD15B5MCY1 1934 aaKnown RBP12.57□□□□□ -0.4
CCM2-213ENST00000480658 LILRB3O75022 631 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 HIP1RO75146 1068 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 EFEMP2O95967 443 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
CCM2-213ENST00000480658 PLS3P13797 630 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 LIG1P18858 919 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 PLA2G5P39877 138 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 GRM5P41594 1212 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 ZXDAP98168 799 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 RINT1Q6NUQ1 792 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 GPR149Q86SP6 731 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
CCM2-213ENST00000480658 SYT2Q8N9I0 419 aaPredicted RBP12.57□□□□□ -0.4
CCM2-213ENST00000480658 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 BCL7CQ8WUZ0 217 aaPredicted RBP12.57□□□□□ -0.4
CCM2-213ENST00000480658 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 KHSRPQ92945 711 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCM2-213ENST00000480658 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 TTPALQ9BTX7 342 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 IRF2BPLQ9H1B7 796 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
CCM2-213ENST00000480658 E9PMD0 336 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 TOM1L1O75674 476 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 BRD1O95696 1058 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 SSBP05455 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCM2-213ENST00000480658 CUL4AQ13619 759 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
CCM2-213ENST00000480658 ECM1Q16610 540 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 RARS2Q5T160 578 aaKnown RBP12.56□□□□□ -0.4
CCM2-213ENST00000480658 KIAA0319Q5VV43 1072 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
CCM2-213ENST00000480658 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 C1orf186Q6ZWK4 172 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 TCHPQ9BT92 498 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 VN1R3Q9BXE9 311 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 MAN1C1Q9NR34 630 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 SNTG2Q9NY99 539 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
CCM2-213ENST00000480658 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
CCM2-213ENST00000480658 C2CD2LO14523 706 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 TEX28O15482 410 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 B4GALT3O60512 393 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 PAPLNO95428 1278 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 EPCAMP16422 314 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 PAX3P23760 479 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 HOXA9P31269 272 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 RBM10P98175 930 aaKnown RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCM2-213ENST00000480658 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 AUTS2Q8WXX7 1259 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 NXPE3Q969Y0 559 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 ACAP3Q96P50 834 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
CCM2-213ENST00000480658 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCM2-213ENST00000480658 KLK14Q9P0G3 267 aa12.55□□□□□ -0.4
CCM2-213ENST00000480658 MORC2Q9Y6X9 1032 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms