RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 DHTKD1Q96HY7 919 aaPredicted RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 TCHPQ9BT92 498 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 HAPLN2Q9GZV7 340 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 C1orf112Q9NSG2 853 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 FAM105AQ9NUU6 356 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 CXXC1Q9P0U4 656 aaPredicted RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 ANKFY1Q9P2R3 1169 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 LIMA1Q9UHB6 759 aaKnown RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 TTC3P53804 2025 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 A0A0U1RQF3 1178 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 TGFB1I1O43294 461 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 KIF20AO95235 890 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 NPTXRO95502 500 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 FAM189BP81408 668 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 MPZL3Q6UWV2 235 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 ZBTB33Q86T24 672 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
EPHB4-204ENST00000477446 NELFBQ8WX92 580 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 CDT1Q9H211 546 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 CTNND2Q9UQB3 1225 aa18.38■□□□□ 0.53
EPHB4-204ENST00000477446 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 PSMA7O14818 248 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 CLDN3O15551 220 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 TNNT1P13805 278 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 ADSSP30520 456 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 BMP8BP34820 402 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 DEFB103AP81534 67 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 RASIP1Q5U651 963 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 ECHDC2Q86YB7 292 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 TRIM6Q9C030 488 aaPredicted RBP18.37■□□□□ 0.53
EPHB4-204ENST00000477446 KCTD10Q9H3F6 313 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 INTS13Q9NVM9 706 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 PCDHB2Q9Y5E7 798 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 STYXL1Q9Y6J8 313 aa18.37■□□□□ 0.53
EPHB4-204ENST00000477446 ZNF623O75123 536 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 AMHP03971 560 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 IBSPP21815 317 aaPredicted RBP18.36■□□□□ 0.53
EPHB4-204ENST00000477446 MATR3P43243 847 aaKnown RBP eCLIP18.36■□□□□ 0.53
EPHB4-204ENST00000477446 RAB27AP51159 221 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 STX17P56962 302 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 MCL1Q07820 350 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 PTPN14Q15678 1187 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 DCAF4L1Q3SXM0 396 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 SLFN12LQ6IEE8 588 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 APTXQ7Z2E3 356 aaKnown RBP18.36■□□□□ 0.53
EPHB4-204ENST00000477446 CRIPAKQ8N1N5 446 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 SMG8Q8ND04 991 aaKnown RBP18.36■□□□□ 0.53
EPHB4-204ENST00000477446 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
EPHB4-204ENST00000477446 HES2Q9Y543 173 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 IPPQ9Y573 584 aa18.36■□□□□ 0.53
EPHB4-204ENST00000477446 UQCRHLA0A096LP55 91 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 A0A0B4J269 797 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 BICDL2A1A5D9 508 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 UQCRHP07919 91 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 MCF2P10911 925 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 HARSP12081 509 aaKnown RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 SKIP12755 728 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 ATF7P17544 494 aaPredicted RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 APBB1IPQ7Z5R6 666 aaPredicted RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 NXF3Q9H4D5 531 aaKnown RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 AGPAT3Q9NRZ7 376 aa18.35■□□□□ 0.53
EPHB4-204ENST00000477446 TYW1Q9NV66 732 aaKnown RBP18.35■□□□□ 0.53
EPHB4-204ENST00000477446 ITIH6Q6UXX5 1313 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 PDXKO00764 312 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 ARHGAP6O43182 974 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 STX10O60499 249 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 HS2ST1Q7LGA3 356 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 TMCO2Q7Z6W1 182 aaPredicted RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 MRPL10Q7Z7H8 261 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 ZNF598Q86UK7 904 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 CEP120Q8N960 986 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 RNF169Q8NCN4 708 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 CBWD1Q9BRT8 395 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 PRO3102Q9H379 93 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 SEMA6BQ9H3T3 888 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 THAP9Q9H5L6 903 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 ELAC1Q9H777 363 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 TMEM161AQ9NX61 479 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 PCDHB7Q9Y5E2 793 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 SLC4A7Q9Y6M7 1214 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 MEIS3P2A8K0S8 358 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 CLIC2O15247 247 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 UPP2O95045 317 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 EOMESO95936 686 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 GARTP22102 1010 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 SNRPFP62306 86 aaKnown RBP18.34■□□□□ 0.53
EPHB4-204ENST00000477446 NYAP1Q6ZVC0 841 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 THNSL1Q8IYQ7 743 aa18.34■□□□□ 0.53
EPHB4-204ENST00000477446 LPPQ93052 612 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms