RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ANXA13P27216 316 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CASP14P31944 242 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 KRT9P35527 623 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 MATR3P43243 847 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 MXI1P50539 228 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CRYBB1P53674 252 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 NLRP11P59045 1033 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 HTRA3P83110 453 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CCZ1BP86790 482 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CCZ1P86791 482 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 TRIM32Q13049 653 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 KCNA10Q16322 511 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 MEA1Q16626 185 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 TMEM132AQ24JP5 1023 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 DCAF4L1Q3SXM0 396 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 KRT39Q6A163 491 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CXCL17Q6UXB2 119 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 SERINC5Q86VE9 423 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 CBWD2Q8IUF1 395 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 BRSK2Q8IWQ3 736 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 GLT1D1Q96MS3 346 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 FNBP1Q96RU3 617 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 BAG1Q99933 345 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 FDXACB1Q9BRP7 624 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 ADPGKQ9BRR6 497 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAM213AQ9BRX8 229 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 KCNF1Q9H3M0 494 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 PCIF1Q9H4Z3 704 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 MMRN2Q9H8L6 949 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 PTPRHQ9HD43 1115 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 RBAKQ9NYW8 714 aaPredicted RBP9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 ANKFY1Q9P2R3 1169 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 HDAC6Q9UBN7 1215 aa9.68□□□□□ -0.86
CDC42EP3-204ENST00000457889 TISP43B9A030 160 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 ABLIM1O14639 778 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 GPR32O75388 356 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 ADRB2P07550 413 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 CLTAP09496 248 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 CCDC172P0C7W6 258 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 EIF4BP23588 611 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 FXR1P51114 621 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 ACLYP53396 1101 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 C1QTNF8P60827 252 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 AMHR2Q16671 573 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 NOTUMQ6P988 496 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 TRIM65Q6PJ69 517 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 CYP26C1Q6V0L0 522 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 CACNA2D4Q7Z3S7 1137 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 CD302Q8IX05 232 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 SAAL1Q96ER3 474 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 TSPAN18Q96SJ8 248 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 LSM14BQ9BX40 385 aaKnown RBP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAM49AQ9H0Q0 323 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 IKZF4Q9H2S9 585 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAM207AQ9NSI2 230 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 PLAGL2Q9UPG8 496 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 PTPN22Q9Y2R2 807 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 COQ4Q9Y3A0 265 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 PTCH2Q9Y6C5 1203 aa9.67□□□□□ -0.86
CDC42EP3-204ENST00000457889 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 GOLGA6L9A6NEM1 432 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 KBTBD13C9JR72 458 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 DNM1LO00429 736 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 TREHO43280 583 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 ZNF500O60304 480 aaPredicted RBP9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAM189A1O60320 539 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 TSPAN1O60635 241 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 GJB1P08034 283 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 TRIM49P0CI25 452 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 TRIM49CP0CI26 452 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 UCHL3P15374 230 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 PON1P27169 355 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 ADKP55263 362 aaKnown RBP9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 MRPS6P82932 125 aaKnown RBP9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 PTK7Q13308 1070 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 PKN2Q16513 984 aaKnown RBP9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 KIZQ2M2Z5 673 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 EPC2Q52LR7 807 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 KLHDC7AQ5VTJ3 777 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 RUFY4Q6ZNE9 571 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 NT5DC4Q86YG4 428 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 WDR49Q8IV35 697 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 CCDC170Q8IYT3 715 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 KIAA1524Q8TCG1 905 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAXDC2Q96IV6 333 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 CGRRF1Q99675 332 aa9.66□□□□□ -0.86
CDC42EP3-204ENST00000457889 CDT1Q9H211 546 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms