RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 C18orf8Q96DM3 657 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 NUDCD1Q96RS6 583 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 RUSC1Q9BVN2 902 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 TACC3Q9Y6A5 838 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 HLA-DRAP01903 254 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 ATP1A2P50993 1020 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 METTL7BQ6UX53 244 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PYROXD1Q8WU10 500 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PCDHB7Q9Y5E2 793 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 MRC1P22897 1456 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 GPR182O15218 404 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 TGFB3P10600 412 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PMLP29590 882 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 IL9RQ01113 521 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 GRIN1Q05586 938 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PTPAQ15257 358 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PCGF5Q86SE9 256 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 RBBP8NLQ8NC74 664 aaPredicted RBP14.75□□□□□ -0.05
RPL28-202ENST00000426763 HDAC11Q96DB2 347 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 ASCC2Q9H1I8 757 aaPredicted RBP14.75□□□□□ -0.05
RPL28-202ENST00000426763 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
RPL28-202ENST00000426763 PAMP19021 973 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 PCSK1P29120 753 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 NAMPTP43490 491 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 PGM5Q15124 567 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 NTRK3Q16288 839 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 TRIM42Q8IWZ5 723 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 ZFPM1Q8IX07 1006 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 DHX38Q92620 1227 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 DDX50Q9BQ39 737 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 RIC1Q4ADV7 1423 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 DCDC2CA8MYV0 355 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 ARHGEF2Q92974 986 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 P2RX7Q99572 595 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 DHX35Q9H5Z1 703 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 ADGRG1Q9Y653 693 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 UCHL3P15374 230 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 PNPLA4P41247 253 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 TMED2Q15363 201 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 KSR1Q8IVT5 923 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 DDX23Q9BUQ8 820 aaKnown RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 EHD2Q9NZN4 543 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 ITIH6Q6UXX5 1313 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 MT-ND3P03897 115 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 ZFXP17010 805 aaPredicted RBP14.74□□□□□ -0.05
RPL28-202ENST00000426763 ARHGAP25P42331 645 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 PPIL2Q13356 520 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 DEPDC1BQ8WUY9 529 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 FSD1LQ9BXM9 530 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 STAG3L1P0CL83 205 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 RASSF2P50749 326 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 PKN1Q16512 942 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 NT5C1AQ9BXI3 368 aa14.74□□□□□ -0.05
RPL28-202ENST00000426763 EXOC1LA0A1B0GW35 172 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 KRT3P12035 628 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 PTPRAP18433 802 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 ARL4CP56559 192 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 BCAR1P56945 870 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 RHBDL3P58872 404 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 IFT43Q96FT9 208 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 OR1G1P47890 313 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 NOP14P78316 857 aaKnown RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.052e-6■■□□□ 13.6
RPL28-202ENST00000426763 FAM117BQ6P1L5 589 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SOCS4Q8WXH5 440 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 NFAT5O94916 1531 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 ZNF189O75820 626 aaPredicted RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 VGLL4Q14135 290 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 C4orf19Q8IY42 314 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 PARD3BQ8TEW8 1205 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 ATP6V1E2Q96A05 226 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 MED15Q96RN5 788 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 KIFC3Q9BVG8 833 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 CAPS2Q9BXY5 557 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SIK2Q9H0K1 926 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 ATP8B1O43520 1251 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SLC1A1P43005 524 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 BFSP2Q13515 415 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SNX17Q15036 470 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 CCDC144BQ3MJ40 725 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 HEATR6Q6AI08 1181 aaKnown RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 CDKL3Q8IVW4 592 aaPredicted RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 PRPF31Q8WWY3 499 aaKnown RBP14.73□□□□□ -0.05
RPL28-202ENST00000426763 NIF3L1Q9GZT8 377 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 SP110Q9HB58 689 aa14.73□□□□□ -0.05
RPL28-202ENST00000426763 GABPB1Q06547 395 aaPredicted RBP14.72□□□□□ -0.05
RPL28-202ENST00000426763 CERS5Q8N5B7 392 aa14.72□□□□□ -0.05
RPL28-202ENST00000426763 AGPAT3Q9NRZ7 376 aa14.72□□□□□ -0.05
RPL28-202ENST00000426763 INTS9Q9NV88 658 aaKnown RBP14.72□□□□□ -0.05
RPL28-202ENST00000426763 PDGFRBP09619 1106 aa14.72□□□□□ -0.05
RPL28-202ENST00000426763 CALRP27797 417 aaKnown RBP14.72□□□□□ -0.05
RPL28-202ENST00000426763 CLCN3P51790 818 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms