RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 ANGPTL3Q9Y5C1 460 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 KCNK3O14649 394 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 CTU1Q7Z7A3 348 aaKnown RBP8.94□□□□□ -0.98
CHD7-201ENST00000423902 SNX9Q9Y5X1 595 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 CCDC66A2RUB6 948 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 RPS6KA2Q15349 733 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 PLA2G4FQ68DD2 849 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
CHD7-201ENST00000423902 IRX5P78411 483 aaPredicted RBP8.94□□□□□ -0.98
CHD7-201ENST00000423902 ZNF280DQ6N043 979 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 HPDLQ96IR7 371 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 GAKO14976 1311 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 SLC2A3P11169 496 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 ATF2P15336 505 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 CTNNB1P35222 781 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 EXOSC10Q01780 885 aaKnown RBP8.94□□□□□ -0.98
CHD7-201ENST00000423902 PGM5Q15124 567 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 KIZQ2M2Z5 673 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 DARS2Q6PI48 645 aaKnown RBP8.94□□□□□ -0.98
CHD7-201ENST00000423902 CTAGE3PQ8IX95 158 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 LRRC71Q8N4P6 559 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.94□□□□□ -0.98
CHD7-201ENST00000423902 PASKQ96RG2 1323 aa8.94□□□□□ -0.98
CHD7-201ENST00000423902 KRT1P04264 644 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 SLC16A3O15427 465 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 FIBCD1Q8N539 461 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 SYNCRIPO60506 623 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 SERPINB6P35237 376 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 FXR2P51116 673 aaKnown RBP eCLIP8.93□□□□□ -0.982e-6■■■■□ 23.1
CHD7-201ENST00000423902 IQCB1Q15051 598 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 SELENOSQ9BQE4 189 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 UBE2OQ9C0C9 1292 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 LCP1P13796 627 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 REPS2Q8NFH8 660 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 RNPC3Q96LT9 517 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 DPP3Q9NY33 737 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 ABI2Q9NYB9 513 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 DDX60Q8IY21 1712 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 CPP00450 1065 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 PSMC1P62191 440 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 GJC2Q5T442 439 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 RHOT2Q8IXI1 618 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 PDCD6IPQ8WUM4 868 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 TMEM51Q9NW97 253 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 NFE2Q16621 373 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 ZNF394Q53GI3 561 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 KLC3Q6P597 504 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 PHF20Q9BVI0 1012 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 SYNDIG1Q9H7V2 258 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 TRPM3Q9HCF6 1732 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 CNTNAP5Q8WYK1 1306 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 IFNAR2P48551 515 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 CUL4AQ13619 759 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 CCDC144BQ3MJ40 725 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 FYB2Q5VWT5 728 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 HSPH1Q92598 858 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 DDX23Q9BUQ8 820 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 COL1A1P02452 1464 aaPredicted RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 ACADMP11310 421 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 RPA1P27694 616 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 LHX1P48742 406 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 NME3Q13232 169 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 LAMB3Q13751 1172 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 WDR72Q3MJ13 1102 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 SPON2Q9BUD6 331 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 VTNP04004 478 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 Q4G0T1 1027 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 PPM1LQ5SGD2 360 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 HERC6Q8IVU3 1022 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 APBB2Q92870 758 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 IGFLR1Q9H665 355 aa8.93□□□□□ -0.98
CHD7-201ENST00000423902 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
CHD7-201ENST00000423902 SMIM23A6NLE4 172 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 GADD45BO75293 160 aaPredicted RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 HSPA6P17066 643 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 AVPR1AP37288 418 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 SPDYE1Q8NFV5 336 aaPredicted RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 FAM107BQ9H098 131 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 SETD4Q9NVD3 440 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 HSPBP1Q9NZL4 362 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 PDXKO00764 312 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 ZBED1O96006 694 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 KPNA1P52294 538 aaPredicted RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 ZWILCHQ9H900 591 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 H3BRJ5 948 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 MTMR3Q13615 1198 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 SNRNP35Q16560 246 aaKnown RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 LY6KQ17RY6 165 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 SMYD4Q8IYR2 804 aaPredicted RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 DAGLBQ8NCG7 672 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 MUC3BQ9H195 1237 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 NDST4Q9H3R1 872 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 JRKLQ9Y4A0 524 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 ZNF235Q14590 738 aa8.92□□□□□ -0.98
CHD7-201ENST00000423902 STN1Q9H668 368 aaKnown RBP8.92□□□□□ -0.98
CHD7-201ENST00000423902 MAD1L1Q9Y6D9 718 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms