RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MMS19Q96T76 1030 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZFATQ9P243 1243 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 H3BNC9 293 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ITGB5P18084 799 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ATP4AP20648 1035 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LEXMQ3ZCV2 418 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LRRC23Q53EV4 343 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PLPPR4Q7Z2D5 763 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ENOX1Q8TC92 643 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NEK1Q96PY6 1258 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FTHL17Q9BXU8 183 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FAM50BQ9Y247 325 aa12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PTPRSQ13332 1948 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 A0A1B0GTH6 734 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FAM237AA0A1B0GTK4 181 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GOLGA6L10A6NI86 522 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TNFRSF8P28908 595 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CCNG1P51959 295 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TFF2Q03403 129 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SFSWAPQ12872 951 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 STK38Q15208 465 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 IER5Q5VY09 327 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 Q6ZUG5 572 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DHX32Q7L7V1 743 aaKnown RBP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PPFIBP1Q86W92 1011 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MMGT1Q8N4V1 131 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GLG1Q92896 1179 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MXRA8Q9BRK3 442 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 BCAS3Q9H6U6 928 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 STXBP3O00186 592 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SPTLC2O15270 562 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GSTA1P08263 222 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CTSHP09668 335 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ALADP13716 330 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PFKFB1P16118 471 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ITIH3Q06033 890 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MGAT3Q09327 533 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CUL3Q13618 768 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GRIK4Q16099 956 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 EPC2Q52LR7 807 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ODR4Q5SWX8 454 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NME8Q8N427 588 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TBC1D31Q96DN5 1066 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GDAP1L1Q96MZ0 367 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SLC9A2Q9UBY0 812 aa12.32□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SIP14410 1827 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 COL4A4P53420 1690 aaPredicted RBP12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 M0QZ92 97 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZBTB43O43298 467 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NPTXRO95502 500 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ECEL1O95672 775 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TPP2P29144 1249 aaPredicted RBP12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 KCNQ1P51787 676 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NAPAP54920 295 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GUCY1A3Q02108 690 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 RTN1Q16799 776 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FAM117BQ6P1L5 589 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TSHZ1Q6ZSZ6 1077 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TMCO2Q7Z6W1 182 aaPredicted RBP12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TMEM192Q8IY95 271 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MIPOL1Q8TD10 442 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PLVAPQ9BX97 442 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 BAIAP2L1Q9UHR4 511 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MICAL3Q7RTP6 2002 aa12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 BAZ2BQ9UIF8 2168 aaKnown RBP12.31□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CFAP73A6NFT4 308 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ATP9AO75110 1047 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MFAP3LO75121 409 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms