RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 TBC1D22BQ9NU19 505 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 USP27XA6NNY8 438 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SFI1A8K8P3 1242 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 GDF11O95390 407 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 KCNQ4P56696 695 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PDCD6IPQ8WUM4 868 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 PDP2Q9P2J9 529 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 KCNA2P16389 499 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 TSPY1Q01534 308 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 C1orf228Q6PIY5 440 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 OR6P1Q8NGX9 317 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 TSPAN17Q96FV3 270 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 POTEMA6NI47 508 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 KCNB1Q14721 858 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 TTC23LQ6PF05 361 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 CDC27P30260 824 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ARHGEF6Q15052 776 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 RCOR2Q8IZ40 523 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 BEST2Q8NFU1 509 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ATP10AO60312 1499 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPEN-201ENST00000375759 BLVRAP53004 296 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 UGP2Q16851 508 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 MTA3Q9BTC8 594 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 STMN3Q9NZ72 180 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 CDC42BPBQ9Y5S2 1711 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 AP3M2P53677 418 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ZNF394Q53GI3 561 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 AARS2Q5JTZ9 985 aaKnown RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 LRRC1Q9BTT6 524 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 MAGI2Q86UL8 1455 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CEP78Q5JTW2 689 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ZNF568Q3ZCX4 644 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 TERB1Q8NA31 727 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 TMA16Q96EY4 203 aaKnown RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 PPP1R2P1Q96PQ5 205 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CCT7Q99832 543 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CASS4Q9NQ75 786 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ITIH2P19823 946 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SERPINB9P50453 376 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SLC44A4Q53GD3 710 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ZFYVE19Q96K21 471 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SPATA17Q96L03 361 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CNBD2Q96M20 576 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SPAG6O75602 509 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 RAB14P61106 215 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 C1orf54Q8WWF1 131 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 THTPAQ9BU02 230 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CCT8L1PA6NM43 557 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 GNAT1P11488 350 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ACADSP16219 412 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SFNP31947 248 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CRKLP46109 303 aaKnown RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 ARPP19P56211 112 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 KYAT1Q16773 422 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CDYLQ9Y232 598 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CDY2AQ9Y6F7 541 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 M0QYV0 167 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ORC4O43929 436 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 FAM107AO95990 144 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 PPHLN1Q8NEY8 458 aaKnown RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 C2orf40Q9H1Z8 148 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CDH6P55285 790 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 P3H1Q32P28 736 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 FAM102AQ5T9C2 384 aaPredicted RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 ROPN1BQ9BZX4 212 aaPredicted RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 ROPN1Q9HAT0 212 aaPredicted RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SELENONQ9NZV5 590 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CAB39Q9Y376 341 aaPredicted RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 AP4S1Q9Y587 144 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 CLK1P49759 484 aaKnown RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 STX3Q13277 289 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 GJC2Q5T442 439 aaPredicted RBP10.36□□□□□ -0.75
SPEN-201ENST00000375759 EFHBQ8N7U6 833 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 LOC102724428A0A0B4J2F2 783 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SIK1P57059 783 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 DSG1Q02413 1049 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 SLC18A3Q16572 532 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 LRRC36Q1X8D7 754 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 OTULINQ96BN8 352 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 FAM213AQ9BRX8 229 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 PCSK1NQ9UHG2 260 aa10.36□□□□□ -0.75
SPEN-201ENST00000375759 PSMD3O43242 534 aa10.35□□□□□ -0.75
SPEN-201ENST00000375759 PROSER3Q2NL68 480 aa10.35□□□□□ -0.75
SPEN-201ENST00000375759 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
SPEN-201ENST00000375759 CENPPQ6IPU0 288 aa10.35□□□□□ -0.75
SPEN-201ENST00000375759 TRIM69Q86WT6 500 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms