RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Ptgs2Q05769 604 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Elmo3Q8BYZ7 720 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Prdm12A2AJ77 365 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gm10801F7C7Q0 168 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Phka1P18826 1241 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ighmbp2P40694 993 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 PrkcbP68404 671 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ice2Q3UZ18 988 aaKnown RBP24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 E2f5Q61502 335 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Vipas39Q8BGQ1 491 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gnl3Q8CI11 538 aaKnown RBP24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 D630039A03RikQ8K0M7 236 aa24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dis3Q9CSH3 958 aaKnown RBP24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Pacsin2Q9WVE8 486 aaKnown RBP24.7■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ccr1P51675 355 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Slc12a2P55012 1205 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 GclcP97494 637 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Frmd5Q6P5H6 517 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Trim37Q6PCX9 961 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Tcp10aQ80W76 438 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 F13a1Q8BH61 732 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Tbx22Q8K402 517 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dact1Q8R4A3 778 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Olfr1499Q8VG65 314 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ces1fQ91WU0 561 aa24.69■■□□□ 1.54
Cln6-201ENSMUST00000034776 Trip13Q3UA06 432 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ccdc34Q3UI66 367 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Rpp40Q8R1F9 363 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 PhykplQ8R1K4 467 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gm4297D3YWB7 211 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 LipeP54310 759 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Grm1P97772 1199 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Rmdn3Q3UJU9 470 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dsg1aQ61495 1057 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gba2Q69ZF3 918 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Naa15Q80UM3 865 aaKnown RBP24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Epn2Q8CHU3 595 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 BbxQ8VBW5 907 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Pcdhgb4Q91XX6 912 aa24.68■■□□□ 1.54
Cln6-201ENSMUST00000034776 Olfr456B2RT27 312 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gja3Q64448 417 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Pja2Q80U04 707 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 OgtQ8CGY8 1046 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Olfr458Q8VF80 313 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Olfr457Q8VGP5 313 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dph5Q9CWQ0 281 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Prg3Q9JL95 222 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 CenphQ9QYM8 241 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Spata31d1dE9Q5W2 1247 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Hdhd2Q3UGR5 259 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ctc1Q5SUQ9 1212 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Icam5Q60625 917 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Klra7Q60654 280 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 AdalQ80SY6 360 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dkc1Q9ESX5 509 aaKnown RBP24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Cpsf3Q9QXK7 684 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Grk1Q9WVL4 564 aa24.67■■□□□ 1.54
Cln6-201ENSMUST00000034776 Nup210lQ9D2F7 1881 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 PtenO08586 403 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Nub1P54729 614 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Cd180Q62192 661 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Snx19Q6P4T1 997 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ccdc57Q6PHN1 1016 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 RubcnQ80U62 956 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Cdkn2aipQ8BI72 563 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Qsox1Q8BND5 748 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Calhm6Q8C9E8 313 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Mbtps2Q8CHX6 515 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Znf830Q8R1N0 363 aaKnown RBP24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ap3m2Q8R2R9 418 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Elp3Q9CZX0 547 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Rnf14Q9JI90 485 aa24.66■■□□□ 1.54
Cln6-201ENSMUST00000034776 Gm13084A2A8N0 494 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Stk10O55098 966 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ap1m1P35585 423 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Tfdp1Q08639 410 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Grm2Q14BI2 872 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Specc1Q5SXY1 1067 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ccdc125Q5U465 500 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ift20Q61025 132 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ppm1eQ80TL0 749 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 PolrmtQ8BKF1 1207 aaKnown RBP24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Dlk2Q8K1E3 382 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Sgip1Q8VD37 806 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Snx29Q9D3S3 818 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Smim10l2aA0A0B4J1F8 78 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ttc17E9PVB5 1198 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Hsd17b1P51656 344 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Clcn3P51791 818 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Scarf2P59222 833 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Snx27Q3UHD6 539 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 OgdhQ60597 1023 aaKnown RBP24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 EsrrbQ61539 433 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Klhl7Q8BUL5 586 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ivns1abpQ920Q8 642 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ssr1Q9CY50 286 aaKnown RBP24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Rexo2Q9D8S4 237 aa24.65■■□□□ 1.54
Cln6-201ENSMUST00000034776 Vamp7P70280 220 aa24.64■■□□□ 1.54
Cln6-201ENSMUST00000034776 Fam92bQ3V2J0 292 aa24.64■■□□□ 1.54
Cln6-201ENSMUST00000034776 Ttf2Q5NC05 1138 aa24.64■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms