RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Fbxo44Q8BK26 255 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rcn2Q8BP92 320 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Slc7a14Q8BXR1 771 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mrfap1Q9CQL7 125 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cnot8Q9D8X5 292 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tfr2Q9JKX3 798 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ror2Q9Z138 944 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mmrn1B2RPV6 1210 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm8298J3QPI0 401 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Usp4P35123 962 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Actr2P61161 394 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Npr3P70180 536 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tfdp1Q08639 410 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Capn13Q3UW68 665 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pkn2Q8BWW9 983 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 CntrobQ8CB62 887 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gpihbp1Q9D1N2 228 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fam111aQ9D2L9 613 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ppil2Q9D787 521 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Znf654Q9DAU9 571 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Adam22Q9R1V6 904 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ric1Q69ZJ7 1422 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Brwd3A2AHJ4 1799 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 XdhQ00519 1335 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fam47eD3YWC7 402 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm15448F6PZL4 682 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Hspa9P38647 679 aaKnown RBP11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rit2P70425 217 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pacsin1Q61644 441 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mcph1Q7TT79 822 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Slc26a7Q8R2Z3 656 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Chn1Q91V57 459 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ubiad1Q9DC60 336 aa11.57□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ltbp4Q8K4G1 1666 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dlg5E9Q9R9 1921 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Nptx2O70340 429 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Znf280dQ68FE8 974 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Eif2aQ8BJW6 581 aaKnown RBP11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tbc1d10cQ8C9V1 444 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tgm5Q9D7I9 724 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gli3Q61602 1583 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ripor3A1L3T7 938 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kcng1A2BDX4 514 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pdzrn4E9PUZ9 1014 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Apol11aE9PZG0 334 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mmp10O55123 476 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pgk2P09041 417 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rb1P13405 921 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fam167bP17257 162 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Hmgcs2P54869 508 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rps12P63323 132 aaKnown RBP11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 SbdsP70122 250 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Grm1P97772 1199 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 RilpQ5ND29 369 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rpf1Q7TND5 349 aaKnown RBP11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 L3mbtl3Q8BLB7 883 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tor1aip2Q8BYU6 502 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 DnerQ8JZM4 737 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccdc65Q8VHI7 493 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Bzw1Q9CQC6 419 aaKnown RBP11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mphosph6Q9D1Q1 161 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fam205a1D3YZF6 1314 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm5168Q4KL04 211 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cyb5d1Q5NCY3 228 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kcnj11Q61743 390 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cd180Q62192 661 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cdc14aQ6GQT0 603 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Snx14Q8BHY8 964 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Inpp5fQ8CDA1 1132 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Bud13Q8R149 637 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rpa1Q8VEE4 623 aaKnown RBP11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 CtsqQ91ZF4 343 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ears2Q9CXJ1 523 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Caln1Q9JJG7 219 aa11.56□□□□□ -0.56
Msh3-201ENSMUST00000022220 Hsf3D0VYS2 492 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 March10E9PX79 788 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Vmn2r87E9PZX4 848 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kcnk16G5E845 292 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ift81O35594 676 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rbm46P86049 533 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dph1Q5NCQ5 438 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kiaa1841Q68FF0 718 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tspyl5Q69ZB3 406 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Supt20hQ7TT00 530 aaKnown RBP11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Chtf18Q8BIW9 969 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 RpgrQ9R0X5 1001 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tll2Q9WVM6 1012 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 DffaO54786 331 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Atp9aO70228 1047 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Stmn2P55821 179 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Lrrc55Q3UY51 311 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ptger2Q62053 362 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Avpr1aQ62463 423 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Zfp449Q8CB76 518 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pomgnt1Q91X88 660 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pls3Q99K51 630 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mxra7Q9CZH7 178 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Sema3fO88632 785 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mmp14P53690 582 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Foxo6Q70KY4 559 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms