RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W SWP82P43554 623 aa8.72□□□□□ -1.01
MSF1YPR047W RET2P43621 546 aa8.72□□□□□ -1.01
MSF1YPR047W YIP4P53093 235 aa8.72□□□□□ -1.01
MSF1YPR047W DUG3P53871 357 aa8.72□□□□□ -1.01
MSF1YPR047W TPO3Q06451 622 aa8.72□□□□□ -1.01
MSF1YPR047W AIM6Q07716 390 aa8.72□□□□□ -1.01
MSF1YPR047W LOT6Q07923 191 aa8.72□□□□□ -1.01
MSF1YPR047W LSO1Q3E827 93 aa8.72□□□□□ -1.01
MSF1YPR047W RPL39P04650 51 aa8.71□□□□□ -1.01
MSF1YPR047W APA2P22108 325 aa8.71□□□□□ -1.01
MSF1YPR047W ZUO1P32527 433 aaKnown RBP8.71□□□□□ -1.01
MSF1YPR047W MCH2P36032 473 aa8.71□□□□□ -1.01
MSF1YPR047W TYW3P53177 273 aa8.71□□□□□ -1.01
MSF1YPR047W VOA1P53262 265 aa8.71□□□□□ -1.01
MSF1YPR047W YDC1Q02896 317 aa8.71□□□□□ -1.01
MSF1YPR047W SNZ1Q03148 297 aa8.71□□□□□ -1.01
MSF1YPR047W PRM15Q03262 622 aa8.71□□□□□ -1.01
MSF1YPR047W GPI17Q04080 534 aa8.71□□□□□ -1.01
MSF1YPR047W PCL9Q12477 304 aa8.71□□□□□ -1.01
MSF1YPR047W YGR161W-CQ3E744 92 aa8.71□□□□□ -1.01
MSF1YPR047W TDH3P00359 332 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
MSF1YPR047W TAL1P15019 335 aaKnown RBP8.71□□□□□ -1.02
MSF1YPR047W FUN19P28003 413 aaPredicted RBP8.71□□□□□ -1.02
MSF1YPR047W VMA11P32842 164 aa8.71□□□□□ -1.02
MSF1YPR047W MRT4P33201 236 aaKnown RBP8.71□□□□□ -1.02
MSF1YPR047W BCK2P33306 851 aa8.71□□□□□ -1.02
MSF1YPR047W YKR015CP36111 568 aa8.71□□□□□ -1.02
MSF1YPR047W YPK3P38070 525 aa8.71□□□□□ -1.02
MSF1YPR047W TAT1P38085 619 aa8.71□□□□□ -1.02
MSF1YPR047W CTR2P38865 189 aa8.71□□□□□ -1.02
MSF1YPR047W SGN1P40561 250 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
MSF1YPR047W AAD14P42884 376 aa8.71□□□□□ -1.02
MSF1YPR047W VMA10P48836 114 aaKnown RBP8.71□□□□□ -1.02
MSF1YPR047W SMM1P53720 384 aaKnown RBP8.71□□□□□ -1.02
MSF1YPR047W COG5P53951 403 aa8.71□□□□□ -1.02
MSF1YPR047W YMD8Q03697 442 aa8.71□□□□□ -1.02
MSF1YPR047W YLR108CQ12259 485 aa8.71□□□□□ -1.02
MSF1YPR047W MES1P00958 751 aaKnown RBP8.7□□□□□ -1.02
MSF1YPR047W KIN28P06242 306 aa8.7□□□□□ -1.02
MSF1YPR047W NAM2P11325 894 aa8.7□□□□□ -1.02
MSF1YPR047W IPT1P38954 527 aa8.7□□□□□ -1.02
MSF1YPR047W PUG1P40100 303 aa8.7□□□□□ -1.02
MSF1YPR047W TIR3P40552 269 aa8.7□□□□□ -1.02
MSF1YPR047W CTK2P46962 323 aa8.7□□□□□ -1.02
MSF1YPR047W YJL016WP47072 561 aa8.7□□□□□ -1.02
MSF1YPR047W BNA2P47125 453 aa8.7□□□□□ -1.02
MSF1YPR047W YMR315WQ04869 349 aaKnown RBP8.7□□□□□ -1.02
MSF1YPR047W ATR1P13090 542 aa8.69□□□□□ -1.02
MSF1YPR047W SNL1P40548 159 aa8.69□□□□□ -1.02
MSF1YPR047W SAM50P53969 484 aa8.69□□□□□ -1.02
MSF1YPR047W RIM9Q04734 239 aa8.69□□□□□ -1.02
MSF1YPR047W MSA1Q08471 629 aa8.69□□□□□ -1.02
MSF1YPR047W PST2Q12335 198 aaKnown RBP8.69□□□□□ -1.02
MSF1YPR047W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
MSF1YPR047W NKP1Q12493 238 aa8.69□□□□□ -1.02
MSF1YPR047W RAS1P01119 309 aa8.68□□□□□ -1.02
MSF1YPR047W FPS1P23900 669 aa8.68□□□□□ -1.02
MSF1YPR047W DEG1P31115 442 aaKnown RBP8.68□□□□□ -1.02
MSF1YPR047W PEP12P32854 288 aa8.68□□□□□ -1.02
MSF1YPR047W ECM8P38246 354 aa8.68□□□□□ -1.02
MSF1YPR047W PDS1P40316 373 aaPredicted RBP8.68□□□□□ -1.02
MSF1YPR047W YRB2P40517 327 aa8.68□□□□□ -1.02
MSF1YPR047W MTL1P53214 551 aa8.68□□□□□ -1.02
MSF1YPR047W SAY1P53324 424 aa8.68□□□□□ -1.02
MSF1YPR047W PXR1P53335 271 aaPredicted RBP8.68□□□□□ -1.02
MSF1YPR047W BUD17P53727 317 aa8.68□□□□□ -1.02
MSF1YPR047W YNR064CP53750 290 aa8.68□□□□□ -1.02
MSF1YPR047W DLT1Q04216 342 aa8.68□□□□□ -1.02
MSF1YPR047W SSE2P32590 693 aaKnown RBP8.67□□□□□ -1.02
MSF1YPR047W FRM2P37261 193 aa8.67□□□□□ -1.02
MSF1YPR047W SLM4P38247 162 aa8.67□□□□□ -1.02
MSF1YPR047W YPR098CQ06089 161 aa8.67□□□□□ -1.02
MSF1YPR047W YOR378WQ08902 515 aa8.67□□□□□ -1.02
MSF1YPR047W ECT1P33412 323 aa8.66□□□□□ -1.02
MSF1YPR047W ARC40P38328 384 aaKnown RBP8.66□□□□□ -1.02
MSF1YPR047W ATF1P40353 525 aa8.66□□□□□ -1.02
MSF1YPR047W GEP7P53171 287 aa8.66□□□□□ -1.02
MSF1YPR047W YNR048WP53740 393 aa8.66□□□□□ -1.02
MSF1YPR047W HHT1P61830 136 aa8.66□□□□□ -1.02
MSF1YPR047W ATG17Q06410 417 aa8.66□□□□□ -1.02
MSF1YPR047W RKM1Q08961 583 aaPredicted RBP8.66□□□□□ -1.02
MSF1YPR047W USB1Q12208 290 aaKnown RBP8.66□□□□□ -1.02
MSF1YPR047W YPL119C-AQ3E751 87 aa8.66□□□□□ -1.02
MSF1YPR047W RPA135P22138 1203 aaKnown RBP8.65□□□□□ -1.02
MSF1YPR047W BAP2P38084 609 aa8.65□□□□□ -1.02
MSF1YPR047W SDP1P40479 209 aa8.65□□□□□ -1.02
MSF1YPR047W GZF3P42944 551 aaKnown RBP8.65□□□□□ -1.02
MSF1YPR047W REC114P32841 428 aa8.64□□□□□ -1.03
MSF1YPR047W CCC1P47818 322 aa8.64□□□□□ -1.03
MSF1YPR047W PPT1P53043 513 aa8.64□□□□□ -1.03
MSF1YPR047W YMR099CQ03161 297 aaKnown RBP8.64□□□□□ -1.03
MSF1YPR047W GAL83Q04739 417 aa8.64□□□□□ -1.03
MSF1YPR047W YLR345WQ06137 509 aa8.64□□□□□ -1.03
MSF1YPR047W ISA2Q12425 185 aa8.64□□□□□ -1.03
MSF1YPR047W RPL30P14120 105 aaKnown RBP8.63□□□□□ -1.03
MSF1YPR047W GPI18P38211 433 aa8.63□□□□□ -1.03
MSF1YPR047W YHR035WP38769 630 aa8.63□□□□□ -1.03
MSF1YPR047W FIN1Q03898 291 aa8.63□□□□□ -1.03
MSF1YPR047W ARP10Q04549 284 aa8.63□□□□□ -1.03
MSF1YPR047W YMR317WQ04893 1140 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms