RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W LOA1Q06508 300 aa1.69□□□□□ -2.14
BRO1YPL084W PRM7Q12459 698 aa1.69□□□□□ -2.14
BRO1YPL084W PHO80P20052 293 aa1.69□□□□□ -2.14
BRO1YPL084W PRE7P23724 241 aaKnown RBP1.69□□□□□ -2.14
BRO1YPL084W YUH1P35127 236 aa1.69□□□□□ -2.14
BRO1YPL084W YBL081WP38180 368 aaKnown RBP1.69□□□□□ -2.14
BRO1YPL084W POP8P38208 133 aa1.69□□□□□ -2.14
BRO1YPL084W TAD2P47058 250 aa1.69□□□□□ -2.14
BRO1YPL084W YDR222WQ04925 415 aa1.69□□□□□ -2.14
BRO1YPL084W YMR316C-AI2HB70 103 aa1.68□□□□□ -2.14
BRO1YPL084W RPP0P05317 312 aaKnown RBP1.68□□□□□ -2.14
BRO1YPL084W AGA2P32781 87 aa1.68□□□□□ -2.14
BRO1YPL084W YFR045WP43617 309 aa1.68□□□□□ -2.14
BRO1YPL084W SWT21P53873 357 aaPredicted RBP1.68□□□□□ -2.14
BRO1YPL084W APJ1P53940 528 aa1.68□□□□□ -2.14
BRO1YPL084W OSH6Q02201 448 aa1.68□□□□□ -2.14
BRO1YPL084W COX20Q04935 205 aa1.68□□□□□ -2.14
BRO1YPL084W NNT1Q05874 261 aa1.68□□□□□ -2.14
BRO1YPL084W SEC10Q06245 871 aa1.68□□□□□ -2.14
BRO1YPL084W DXO1Q06349 442 aa1.68□□□□□ -2.14
BRO1YPL084W YDL144CQ07589 356 aa1.68□□□□□ -2.14
BRO1YPL084W BUD4P47136 1447 aa1.68□□□□□ -2.14
BRO1YPL084W YAL064W-BO13512 126 aa1.68□□□□□ -2.14
BRO1YPL084W RPS23AP0CX29 145 aaKnown RBP1.68□□□□□ -2.14
BRO1YPL084W RPS23BP0CX30 145 aa1.68□□□□□ -2.14
BRO1YPL084W YAK1P14680 807 aa1.68□□□□□ -2.14
BRO1YPL084W POL30P15873 258 aaKnown RBP1.68□□□□□ -2.14
BRO1YPL084W OSM1P21375 501 aaKnown RBP1.68□□□□□ -2.14
BRO1YPL084W CAT2P32796 670 aaKnown RBP1.68□□□□□ -2.14
BRO1YPL084W SER33P40510 469 aa1.68□□□□□ -2.14
BRO1YPL084W CPR7P47103 393 aa1.68□□□□□ -2.14
BRO1YPL084W CTR3Q06686 241 aa1.68□□□□□ -2.14
BRO1YPL084W RRT8Q08219 342 aa1.68□□□□□ -2.14
BRO1YPL084W YPR063CQ12160 140 aa1.68□□□□□ -2.14
BRO1YPL084W COX2P00410 251 aa1.67□□□□□ -2.14
BRO1YPL084W HIS1P00498 297 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W KRE6P32486 720 aa1.67□□□□□ -2.14
BRO1YPL084W PHO89P38361 574 aa1.67□□□□□ -2.14
BRO1YPL084W ECO1P43605 281 aa1.67□□□□□ -2.14
BRO1YPL084W FMP41P53889 259 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W TRM44Q02648 567 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W OST6Q03723 332 aa1.67□□□□□ -2.14
BRO1YPL084W ATC1Q04005 294 aa1.67□□□□□ -2.14
BRO1YPL084W YOL107WQ12239 342 aa1.67□□□□□ -2.14
BRO1YPL084W ATG5Q12380 294 aa1.67□□□□□ -2.14
BRO1YPL084W CAM1P29547 415 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W YHL044WP38727 235 aa1.67□□□□□ -2.14
BRO1YPL084W PRM9P39551 298 aa1.67□□□□□ -2.14
BRO1YPL084W NPT1P39683 429 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W TIM21P53220 239 aa1.67□□□□□ -2.14
BRO1YPL084W MNT4P53745 580 aa1.67□□□□□ -2.14
BRO1YPL084W SDC1Q03323 175 aa1.67□□□□□ -2.14
BRO1YPL084W BTS1Q12051 335 aa1.67□□□□□ -2.14
BRO1YPL084W SGT2Q12118 346 aaKnown RBP1.67□□□□□ -2.14
BRO1YPL084W PEX3P28795 441 aa1.66□□□□□ -2.14
BRO1YPL084W RPT5P33297 434 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W RPE1P46969 238 aa1.66□□□□□ -2.14
BRO1YPL084W ALG11P53954 548 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W YOS9Q99220 542 aa1.66□□□□□ -2.14
BRO1YPL084W MRP1P10662 321 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W RPL4AP10664 362 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W ECM14P38836 430 aa1.66□□□□□ -2.14
BRO1YPL084W SMC2P38989 1170 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W DDI1P40087 428 aa1.66□□□□□ -2.14
BRO1YPL084W YAR1P46683 200 aa1.66□□□□□ -2.14
BRO1YPL084W RPL4BP49626 362 aaKnown RBP1.66□□□□□ -2.14
BRO1YPL084W NBP1P52919 319 aaPredicted RBP1.66□□□□□ -2.14
BRO1YPL084W NBP35P52920 328 aa1.66□□□□□ -2.14
BRO1YPL084W MSF1P08425 469 aa1.65□□□□□ -2.15
BRO1YPL084W YOL163WP0CF20 169 aa1.65□□□□□ -2.15
BRO1YPL084W RSR1P13856 272 aa1.65□□□□□ -2.15
BRO1YPL084W DAL82P21705 255 aa1.65□□□□□ -2.15
BRO1YPL084W ERG2P32352 222 aa1.65□□□□□ -2.15
BRO1YPL084W ALK2P32789 676 aaPredicted RBP1.65□□□□□ -2.15
BRO1YPL084W TKL2P33315 681 aa1.65□□□□□ -2.15
BRO1YPL084W SHC1P39000 512 aa1.65□□□□□ -2.15
BRO1YPL084W MAL13P53338 473 aa1.65□□□□□ -2.15
BRO1YPL084W YNL095CP53932 642 aa1.65□□□□□ -2.15
BRO1YPL084W SWS2P53937 143 aa1.65□□□□□ -2.15
BRO1YPL084W CTS2Q06350 511 aa1.65□□□□□ -2.15
BRO1YPL084W YPL150WQ12152 901 aa1.65□□□□□ -2.15
BRO1YPL084W HEK2P38199 381 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
BRO1YPL084W MED8P38304 223 aa1.65□□□□□ -2.15
BRO1YPL084W RPL10P41805 221 aaKnown RBP1.65□□□□□ -2.15
BRO1YPL084W YJR012CP47087 207 aa1.65□□□□□ -2.15
BRO1YPL084W MIG2P53035 382 aa1.65□□□□□ -2.15
BRO1YPL084W RSM27P53305 110 aa1.65□□□□□ -2.15
BRO1YPL084W TVP15Q03860 143 aa1.65□□□□□ -2.15
BRO1YPL084W ADH6Q04894 360 aaKnown RBP1.65□□□□□ -2.15
BRO1YPL084W YPS3Q12303 508 aa1.65□□□□□ -2.15
BRO1YPL084W PRR2Q12310 699 aa1.65□□□□□ -2.15
BRO1YPL084W SME1Q12330 94 aaPredicted RBP1.65□□□□□ -2.15
BRO1YPL084W DRS2P39524 1355 aa1.64□□□□□ -2.15
BRO1YPL084W RRT12P25381 491 aa1.64□□□□□ -2.15
BRO1YPL084W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
BRO1YPL084W HMT1P38074 348 aa1.64□□□□□ -2.15
BRO1YPL084W TRM7P38238 310 aaKnown RBP1.64□□□□□ -2.15
BRO1YPL084W ALG9P53868 555 aaKnown RBP1.64□□□□□ -2.15
BRO1YPL084W YPL039WQ03080 316 aa1.64□□□□□ -2.15
BRO1YPL084W AI5_BETAQ9ZZX0 354 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms