RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W TAD2P47058 250 aa3.29□□□□□ -1.88
VPS28YPL065W MNT4P53745 580 aa3.29□□□□□ -1.88
VPS28YPL065W ATC1Q04005 294 aa3.29□□□□□ -1.88
VPS28YPL065W NNT1Q05874 261 aa3.29□□□□□ -1.88
VPS28YPL065W DXO1Q06349 442 aa3.29□□□□□ -1.88
VPS28YPL065W CTR3Q06686 241 aa3.29□□□□□ -1.88
VPS28YPL065W ATG5Q12380 294 aa3.29□□□□□ -1.88
VPS28YPL065W YAL064W-BO13512 126 aa3.28□□□□□ -1.88
VPS28YPL065W HIS1P00498 297 aaKnown RBP3.28□□□□□ -1.88
VPS28YPL065W YAK1P14680 807 aa3.28□□□□□ -1.88
VPS28YPL065W KRE6P32486 720 aa3.28□□□□□ -1.88
VPS28YPL065W YHL044WP38727 235 aa3.28□□□□□ -1.88
VPS28YPL065W NPT1P39683 429 aaKnown RBP3.28□□□□□ -1.88
VPS28YPL065W NBP1P52919 319 aaPredicted RBP3.28□□□□□ -1.88
VPS28YPL065W SDC1Q03323 175 aa3.28□□□□□ -1.88
VPS28YPL065W YOS9Q99220 542 aa3.28□□□□□ -1.88
VPS28YPL065W OSM1P21375 501 aaKnown RBP3.27□□□□□ -1.89
VPS28YPL065W PEX3P28795 441 aa3.27□□□□□ -1.89
VPS28YPL065W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VPS28YPL065W PHO89P38361 574 aa3.27□□□□□ -1.89
VPS28YPL065W ECO1P43605 281 aa3.27□□□□□ -1.89
VPS28YPL065W YAR1P46683 200 aa3.27□□□□□ -1.89
VPS28YPL065W SWS2P53937 143 aa3.27□□□□□ -1.89
VPS28YPL065W CTS2Q06350 511 aa3.27□□□□□ -1.89
VPS28YPL065W RSR1P13856 272 aa3.26□□□□□ -1.89
VPS28YPL065W CAM1P29547 415 aaKnown RBP3.26□□□□□ -1.89
VPS28YPL065W DDI1P40087 428 aa3.26□□□□□ -1.89
VPS28YPL065W YNL095CP53932 642 aa3.26□□□□□ -1.89
VPS28YPL065W ALG11P53954 548 aaKnown RBP3.26□□□□□ -1.89
VPS28YPL065W BTS1Q12051 335 aa3.26□□□□□ -1.89
VPS28YPL065W YPR063CQ12160 140 aa3.26□□□□□ -1.89
VPS28YPL065W ERG2P32352 222 aa3.25□□□□□ -1.89
VPS28YPL065W ALK2P32789 676 aaPredicted RBP3.25□□□□□ -1.89
VPS28YPL065W MED8P38304 223 aa3.25□□□□□ -1.89
VPS28YPL065W ECM14P38836 430 aa3.25□□□□□ -1.89
VPS28YPL065W SMC2P38989 1170 aaKnown RBP3.25□□□□□ -1.89
VPS28YPL065W RPE1P46969 238 aa3.25□□□□□ -1.89
VPS28YPL065W NBP35P52920 328 aa3.25□□□□□ -1.89
VPS28YPL065W TIM21P53220 239 aa3.25□□□□□ -1.89
VPS28YPL065W YPL039WQ03080 316 aa3.25□□□□□ -1.89
VPS28YPL065W PRR2Q12310 699 aa3.25□□□□□ -1.89
VPS28YPL065W AI5_BETAQ9ZZX0 354 aa3.25□□□□□ -1.89
VPS28YPL065W MSF1P08425 469 aa3.24□□□□□ -1.89
VPS28YPL065W YOL163WP0CF20 169 aa3.24□□□□□ -1.89
VPS28YPL065W MRP1P10662 321 aaKnown RBP3.24□□□□□ -1.89
VPS28YPL065W RPL4AP10664 362 aaKnown RBP3.24□□□□□ -1.89
VPS28YPL065W RRT12P25381 491 aa3.24□□□□□ -1.89
VPS28YPL065W TKL2P33315 681 aa3.24□□□□□ -1.89
VPS28YPL065W HMT1P38074 348 aa3.24□□□□□ -1.89
VPS28YPL065W RPL4BP49626 362 aaKnown RBP3.24□□□□□ -1.89
VPS28YPL065W MAL13P53338 473 aa3.24□□□□□ -1.89
VPS28YPL065W SME1Q12330 94 aaPredicted RBP3.24□□□□□ -1.89
VPS28YPL065W STH1P32597 1359 aa3.24□□□□□ -1.89
VPS28YPL065W PAN1P32521 1480 aa3.23□□□□□ -1.89
VPS28YPL065W DAL82P21705 255 aa3.23□□□□□ -1.89
VPS28YPL065W CWP1P28319 239 aa3.23□□□□□ -1.89
VPS28YPL065W HEK2P38199 381 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89 RIP-Chip
VPS28YPL065W ARN2P38724 620 aa3.23□□□□□ -1.89
VPS28YPL065W BIG1P38813 335 aa3.23□□□□□ -1.89
VPS28YPL065W SHC1P39000 512 aa3.23□□□□□ -1.89
VPS28YPL065W YJR012CP47087 207 aa3.23□□□□□ -1.89
VPS28YPL065W IGO1P53897 168 aa3.23□□□□□ -1.89
VPS28YPL065W RRN5Q02983 363 aa3.23□□□□□ -1.89
VPS28YPL065W YMR166CQ03829 368 aa3.23□□□□□ -1.89
VPS28YPL065W TVP15Q03860 143 aa3.23□□□□□ -1.89
VPS28YPL065W ADH6Q04894 360 aaKnown RBP3.23□□□□□ -1.89
VPS28YPL065W YPS3Q12303 508 aa3.23□□□□□ -1.89
VPS28YPL065W COY1P34237 679 aa3.22□□□□□ -1.89
VPS28YPL065W TRM7P38238 310 aaKnown RBP3.22□□□□□ -1.89
VPS28YPL065W YHL049CP38722 271 aa3.22□□□□□ -1.89
VPS28YPL065W YNL134CP53912 376 aaKnown RBP3.22□□□□□ -1.89
VPS28YPL065W EBS1Q03466 884 aaKnown RBP3.22□□□□□ -1.89
VPS28YPL065W QRI5P32344 111 aa3.21□□□□□ -1.9
VPS28YPL065W PRS2P38620 318 aaKnown RBP3.21□□□□□ -1.9
VPS28YPL065W RPL10P41805 221 aaKnown RBP3.21□□□□□ -1.9
VPS28YPL065W MIG2P53035 382 aa3.21□□□□□ -1.9
VPS28YPL065W ALG9P53868 555 aaKnown RBP3.21□□□□□ -1.9
VPS28YPL065W RAD3P06839 778 aa3.2□□□□□ -1.9
VPS28YPL065W CSG2P35206 410 aa3.2□□□□□ -1.9
VPS28YPL065W SUR2P38992 349 aa3.2□□□□□ -1.9
VPS28YPL065W BNA6P43619 295 aa3.2□□□□□ -1.9
VPS28YPL065W RSM27P53305 110 aa3.2□□□□□ -1.9
VPS28YPL065W YLR173WQ06247 608 aa3.2□□□□□ -1.9
VPS28YPL065W SDO1Q07953 250 aaKnown RBP3.2□□□□□ -1.9
VPS28YPL065W YOL019WQ08157 551 aa3.2□□□□□ -1.9
VPS28YPL065W YPL150WQ12152 901 aa3.2□□□□□ -1.9
VPS28YPL065W YOR029WQ12243 111 aa3.2□□□□□ -1.9
VPS28YPL065W MRX4Q12467 430 aa3.2□□□□□ -1.9
VPS28YPL065W YBL112CQ3E7Y4 105 aa3.2□□□□□ -1.9
VPS28YPL065W COS2P0CX12 379 aa3.19□□□□□ -1.9
VPS28YPL065W COS3P0CX13 379 aa3.19□□□□□ -1.9
VPS28YPL065W PRS4P38063 326 aaPredicted RBP3.19□□□□□ -1.9
VPS28YPL065W YHR045WP38775 560 aa3.19□□□□□ -1.9
VPS28YPL065W SPL2P38839 148 aa3.19□□□□□ -1.9
VPS28YPL065W BUD13P46947 266 aaPredicted RBP3.19□□□□□ -1.9
VPS28YPL065W PLB3Q08108 686 aa3.19□□□□□ -1.9
VPS28YPL065W RFM1Q12192 310 aa3.19□□□□□ -1.9
VPS28YPL065W YPL119C-AQ3E751 87 aa3.19□□□□□ -1.9
VPS28YPL065W NUP157P40064 1391 aaKnown RBP3.18□□□□□ -1.9
VPS28YPL065W YHI9P38765 294 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms