RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	JEN1	P36035	616 aa		3.12	□□□□□ -1.91
DSL1	YNL258C	GOS1	P38736	223 aa		3.12	□□□□□ -1.91
DSL1	YNL258C	YMR114C	Q04471	368 aa	Known RBP	3.12	□□□□□ -1.91
DSL1	YNL258C	TAF9	Q05027	157 aa		3.12	□□□□□ -1.91
DSL1	YNL258C	YAL063C-A	Q3E791	96 aa		3.12	□□□□□ -1.91
DSL1	YNL258C	ASP3-2	P0CX77	362 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	ASP3-3	P0CX78	362 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	ASP3-4	P0CX79	362 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	ASP3-1	P0CZ17	362 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	CMK2	P22517	447 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	SWD3	P38123	315 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	SHC1	P39000	512 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	THO1	P40040	218 aa	Known RBP	3.11	□□□□□ -1.91
DSL1	YNL258C	UTP18	P40362	594 aa	Predicted RBP	3.11	□□□□□ -1.91
DSL1	YNL258C	YJR149W	P47177	404 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	ZRG17	P53735	605 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	ACT1	P60010	375 aa	Known RBP	3.11	□□□□□ -1.91
DSL1	YNL258C	BNA7	Q04066	261 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	AI5_BETA	Q9ZZX0	354 aa		3.11	□□□□□ -1.91
DSL1	YNL258C	COS2	P0CX12	379 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	COS3	P0CX13	379 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	TIP20	P33891	701 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	MAL32	P38158	584 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	SHE3	P38272	425 aa	Known RBP	3.1	□□□□□ -1.91
DSL1	YNL258C	COS4	P43542	379 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	MAL12	P53341	584 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	UTP15	Q04305	513 aa	Known RBP	3.1	□□□□□ -1.91
DSL1	YNL258C	CLP1	Q08685	445 aa	Predicted RBP	3.1	□□□□□ -1.91
DSL1	YNL258C	TIR4	Q12218	487 aa	Predicted RBP	3.1	□□□□□ -1.91
DSL1	YNL258C	YOL085C	Q99345	113 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	OM14	P38325	134 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	CPR7	P47103	393 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	USE1	P53146	245 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	PER33	Q12144	273 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	HMS1	Q12398	434 aa		3.1	□□□□□ -1.91
DSL1	YNL258C	AAT2	P23542	418 aa	Known RBP	3.09	□□□□□ -1.91
DSL1	YNL258C	VPH2	P32341	215 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	MED8	P38304	223 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	YNL194C	P40169	301 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	YRB2	P40517	327 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	GAB1	P41733	394 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	PLB3	Q08108	686 aa		3.09	□□□□□ -1.91
DSL1	YNL258C	YBR121C-A	P0C5L4	52 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	POX1	P13711	748 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	ALK2	P32789	676 aa	Predicted RBP	3.09	□□□□□ -1.92
DSL1	YNL258C	PRX1	P34227	261 aa	Known RBP	3.09	□□□□□ -1.92
DSL1	YNL258C	MRPL10	P36520	322 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	YHL049C	P38722	271 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	NIF3	P53081	288 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	TOS8	P53147	276 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	FMP41	P53889	259 aa	Known RBP	3.09	□□□□□ -1.92
DSL1	YNL258C	YPL113C	Q02961	396 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	YMR010W	Q03687	405 aa		3.09	□□□□□ -1.92
DSL1	YNL258C	STE18	P18852	110 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	RFA3	P26755	122 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	CDC13	P32797	924 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	ARC19	P33204	171 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	AVT7	P40501	490 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	YDR209C	Q03480	137 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	MMT2	Q08970	484 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	RFM1	Q12192	310 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	HRT3	Q12347	344 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	YPL119C-A	Q3E751	87 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	RPL4A	P10664	362 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	RFC4	P40339	323 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	STB1	P42845	420 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	RPL4B	P49626	362 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	MGA1	P53050	456 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	NOP19	P53317	196 aa	Predicted RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	NRM1	P53718	249 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	IMP4	P53941	290 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	ASI3	P53983	676 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	YMR244W	Q04018	355 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	PAL1	Q05518	499 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	ECM19	Q06011	112 aa		3.08	□□□□□ -1.92
DSL1	YNL258C	ABP140	Q08641	628 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	RRG7	Q08774	242 aa	Predicted RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	RPL21B	Q12672	160 aa	Known RBP	3.08	□□□□□ -1.92
DSL1	YNL258C	YPT53	P36019	220 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	SMP1	P38128	452 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	EFM1	P38732	585 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	YGL034C	P53186	121 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	VHS1	Q03785	461 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	SPT3	P06844	337 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	BGL2	P15703	313 aa	Known RBP	3.07	□□□□□ -1.92
DSL1	YNL258C	SRY1	P36007	326 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	ERG10	P41338	398 aa	Known RBP	3.07	□□□□□ -1.92
DSL1	YNL258C	YPI1	P43587	155 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	MRX11	Q03079	207 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	YDR222W	Q04925	415 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	TRM10	Q12400	293 aa		3.07	□□□□□ -1.92
DSL1	YNL258C	QCR7	P00128	127 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	MATALPHA2	P0CY08	210 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	HMLALPHA2	P0CY09	210 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	PHO80	P20052	293 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	RPB9	P27999	122 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	MRPL3	P36516	390 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.06	□□□□□ -1.92	not detected
DSL1	YNL258C	YFL064C	P43540	174 aa		3.06	□□□□□ -1.92
DSL1	YNL258C	MIC26	P50087	233 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms