RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W ECO1P43605 281 aa5.27□□□□□ -1.57
ATG4YNL223W RMD9P53140 646 aaKnown RBP5.27□□□□□ -1.57
ATG4YNL223W MRPL13Q02204 264 aa5.27□□□□□ -1.57
ATG4YNL223W SDC1Q03323 175 aa5.27□□□□□ -1.57
ATG4YNL223W AIM36Q03798 255 aa5.27□□□□□ -1.57
ATG4YNL223W PEX30Q06169 523 aa5.27□□□□□ -1.57
ATG4YNL223W CTS2Q06350 511 aa5.27□□□□□ -1.57
ATG4YNL223W YPR196WQ06595 470 aa5.27□□□□□ -1.57
ATG4YNL223W MCH4Q08268 501 aa5.27□□□□□ -1.57
ATG4YNL223W SYC1Q08553 188 aaPredicted RBP5.27□□□□□ -1.57
ATG4YNL223W ENV7Q12003 364 aa5.27□□□□□ -1.57
ATG4YNL223W MDM32Q12171 622 aa5.27□□□□□ -1.57
ATG4YNL223W INP53Q12271 1107 aa5.27□□□□□ -1.57
ATG4YNL223W MTR10Q99189 972 aa5.27□□□□□ -1.57
ATG4YNL223W GLT1Q12680 2145 aaKnown RBP5.27□□□□□ -1.57
ATG4YNL223W FLO9P39712 1322 aa5.27□□□□□ -1.57
ATG4YNL223W PDX1P16451 410 aa5.26□□□□□ -1.57
ATG4YNL223W MEK1P24719 497 aaPredicted RBP5.26□□□□□ -1.57
ATG4YNL223W NFS1P25374 497 aa5.26□□□□□ -1.57
ATG4YNL223W CNE1P27825 502 aa5.26□□□□□ -1.57
ATG4YNL223W ITR1P30605 584 aa5.26□□□□□ -1.57
ATG4YNL223W MKS1P34072 584 aa5.26□□□□□ -1.57
ATG4YNL223W CLG1P35190 452 aa5.26□□□□□ -1.57
ATG4YNL223W BOL3P39724 118 aa5.26□□□□□ -1.57
ATG4YNL223W SER3P40054 469 aa5.26□□□□□ -1.57
ATG4YNL223W AAD14P42884 376 aa5.26□□□□□ -1.57
ATG4YNL223W IKS1P47042 667 aa5.26□□□□□ -1.57
ATG4YNL223W MSY1P48527 492 aa5.26□□□□□ -1.57
ATG4YNL223W DIE2P50076 525 aa5.26□□□□□ -1.57
ATG4YNL223W YGR066CP53242 292 aa5.26□□□□□ -1.57
ATG4YNL223W RSM10Q03201 203 aa5.26□□□□□ -1.57
ATG4YNL223W YMR130WQ04223 302 aa5.26□□□□□ -1.57
ATG4YNL223W NNT1Q05874 261 aa5.26□□□□□ -1.57
ATG4YNL223W KEI1Q06346 221 aa5.26□□□□□ -1.57
ATG4YNL223W SCM3Q12334 223 aa5.26□□□□□ -1.57
ATG4YNL223W YHR214C-EQ8TGK0 99 aa5.26□□□□□ -1.57
ATG4YNL223W MSW1P04803 379 aa5.26□□□□□ -1.57
ATG4YNL223W MATALPHA1P0CY06 175 aa5.26□□□□□ -1.57
ATG4YNL223W HMLALPHA1P0CY07 175 aa5.26□□□□□ -1.57
ATG4YNL223W UTR1P21373 530 aa5.26□□□□□ -1.57
ATG4YNL223W MDH2P22133 377 aa5.26□□□□□ -1.57
ATG4YNL223W ATG22P25568 528 aa5.26□□□□□ -1.57
ATG4YNL223W KRR1P25586 316 aaPredicted RBP5.26□□□□□ -1.57
ATG4YNL223W RNP1P32385 249 aa5.26□□□□□ -1.57
ATG4YNL223W PPQ1P32945 549 aa5.26□□□□□ -1.57
ATG4YNL223W APD1P38281 316 aa5.26□□□□□ -1.57
ATG4YNL223W YBR242WP38331 238 aa5.26□□□□□ -1.57
ATG4YNL223W MNN5P46982 586 aa5.26□□□□□ -1.57
ATG4YNL223W LYS5P50113 272 aa5.26□□□□□ -1.57
ATG4YNL223W YIP4P53093 235 aa5.26□□□□□ -1.57
ATG4YNL223W MTM1P53320 366 aa5.26□□□□□ -1.57
ATG4YNL223W BSC5P53755 489 aa5.26□□□□□ -1.57
ATG4YNL223W PDR16P53860 351 aaKnown RBP5.26□□□□□ -1.57
ATG4YNL223W ATG4P53867 494 aa5.26□□□□□ -1.57
ATG4YNL223W YLR152CP54072 576 aa5.26□□□□□ -1.57
ATG4YNL223W YDR102CQ03864 110 aa5.26□□□□□ -1.57
ATG4YNL223W RTC5Q12108 567 aaKnown RBP5.26□□□□□ -1.57
ATG4YNL223W YLR125WQ12138 136 aa5.26□□□□□ -1.57
ATG4YNL223W YRM1Q12340 786 aa5.26□□□□□ -1.57
ATG4YNL223W ORT1Q12375 292 aa5.26□□□□□ -1.57
ATG4YNL223W SCEIP03882 235 aa5.25□□□□□ -1.57
ATG4YNL223W SPS2P08459 502 aa5.25□□□□□ -1.57
ATG4YNL223W YFR010W-AP0C5N0 62 aa5.25□□□□□ -1.57
ATG4YNL223W AIM3P38266 947 aaKnown RBP5.25□□□□□ -1.57
ATG4YNL223W YHR122WP38829 231 aa5.25□□□□□ -1.57
ATG4YNL223W SMB1P40018 196 aaKnown RBP5.25□□□□□ -1.57
ATG4YNL223W TIR3P40552 269 aa5.25□□□□□ -1.57
ATG4YNL223W CAT5P41735 233 aa5.25□□□□□ -1.57
ATG4YNL223W PRY1P47032 299 aa5.25□□□□□ -1.57
ATG4YNL223W VHT1P53241 593 aa5.25□□□□□ -1.57
ATG4YNL223W PBP1P53297 722 aaKnown RBP5.25□□□□□ -1.57
ATG4YNL223W HOL1P53389 586 aa5.25□□□□□ -1.57
ATG4YNL223W SAM50P53969 484 aa5.25□□□□□ -1.57
ATG4YNL223W MRPS16Q02608 121 aa5.25□□□□□ -1.57
ATG4YNL223W HEM25Q07534 307 aa5.25□□□□□ -1.57
ATG4YNL223W HTZ1Q12692 134 aaKnown RBP5.25□□□□□ -1.57
ATG4YNL223W ACC1Q00955 2233 aaKnown RBP5.25□□□□□ -1.57
ATG4YNL223W IRA2P19158 3079 aa5.24□□□□□ -1.57
ATG4YNL223W FUR4P05316 633 aaKnown RBP5.24□□□□□ -1.57
ATG4YNL223W PRB1P09232 635 aa5.24□□□□□ -1.57
ATG4YNL223W SPO7P18410 259 aa5.24□□□□□ -1.57
ATG4YNL223W PPG1P32838 368 aa5.24□□□□□ -1.57
ATG4YNL223W SOF1P33750 489 aaKnown RBP5.24□□□□□ -1.57
ATG4YNL223W YER158CP40095 573 aa5.24□□□□□ -1.57
ATG4YNL223W YIL169CP40442 995 aa5.24□□□□□ -1.57
ATG4YNL223W MTL1P53214 551 aa5.24□□□□□ -1.57
ATG4YNL223W FMP48P53233 369 aa5.24□□□□□ -1.57
ATG4YNL223W BUD25P85052 153 aa5.24□□□□□ -1.57
ATG4YNL223W KAP120Q02932 1032 aa5.24□□□□□ -1.57
ATG4YNL223W YPL272CQ08984 517 aa5.24□□□□□ -1.57
ATG4YNL223W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
ATG4YNL223W GRX2P17695 143 aaKnown RBP5.23□□□□□ -1.57
ATG4YNL223W SEC62P21825 274 aa5.23□□□□□ -1.57
ATG4YNL223W MRPL3P36516 390 aa5.23□□□□□ -1.57
ATG4YNL223W FRM2P37261 193 aa5.23□□□□□ -1.57
ATG4YNL223W SSH1P38353 490 aaKnown RBP5.23□□□□□ -1.57
ATG4YNL223W PUG1P40100 303 aa5.23□□□□□ -1.57
ATG4YNL223W SLZ1P40167 298 aa5.23□□□□□ -1.57
ATG4YNL223W DLS1P40366 167 aa5.23□□□□□ -1.57
ATG4YNL223W YIL060WP40519 144 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms