RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YPL278CQ08990 100 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A AI5_BETAQ9ZZX0 354 aa3.52□□□□□ -1.85
YNL054W-AYNL054W-A CDC42P19073 191 aa3.51□□□□□ -1.85
YNL054W-AYNL054W-A SEO1P39709 593 aa3.51□□□□□ -1.85
YNL054W-AYNL054W-A RTR1P40084 226 aaPredicted RBP3.51□□□□□ -1.85
YNL054W-AYNL054W-A UFE1P41834 346 aa3.51□□□□□ -1.85
YNL054W-AYNL054W-A MYO5Q04439 1219 aaKnown RBP3.51□□□□□ -1.85
YNL054W-AYNL054W-A STH1P32597 1359 aa3.51□□□□□ -1.85
YNL054W-AYNL054W-A MATALPHA1P0CY06 175 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A HMLALPHA1P0CY07 175 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A MRP21P38175 177 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A LDB7P38210 180 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A SEN34P39707 275 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A KRE29P40026 464 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A OTU1P43558 301 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A HOC1P47124 396 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A FMP41P53889 259 aaKnown RBP3.5□□□□□ -1.85
YNL054W-AYNL054W-A EBS1Q03466 884 aaKnown RBP3.5□□□□□ -1.85
YNL054W-AYNL054W-A KRE28Q04431 385 aa3.5□□□□□ -1.85
YNL054W-AYNL054W-A RNA15P25299 296 aaPredicted RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A HOM6P31116 359 aaKnown RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A TPS2P31688 896 aaKnown RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A KRE6P32486 720 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A ASP1P38986 381 aaPredicted RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A MSS2P40990 351 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A PRP24P49960 444 aaKnown RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A YGL118CP53132 145 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A CWC21Q03375 135 aaKnown RBP3.49□□□□□ -1.85
YNL054W-AYNL054W-A MCH1Q07376 486 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A YDL144CQ07589 356 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A SNF8Q12483 233 aa3.49□□□□□ -1.85
YNL054W-AYNL054W-A ARG80P07249 177 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A IMP1P28627 190 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A YBR096WP38256 230 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A EDC2P40023 145 aaPredicted RBP3.48□□□□□ -1.85
YNL054W-AYNL054W-A YIL012WP40551 113 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A HSH155P49955 971 aaKnown RBP3.48□□□□□ -1.85
YNL054W-AYNL054W-A COG7P53195 279 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A YGR067CP53243 804 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A MRPL50P53724 139 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
YNL054W-AYNL054W-A NOP13P53883 403 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
YNL054W-AYNL054W-A MRS2Q01926 470 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A AUS1Q08409 1394 aa3.48□□□□□ -1.85
YNL054W-AYNL054W-A COS2P0CX12 379 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A COS3P0CX13 379 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A RPL4AP10664 362 aaKnown RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A TCP1P12612 559 aaKnown RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A NTG1P31378 399 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A BMH2P34730 273 aaKnown RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A POP8P38208 133 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A MED8P38304 223 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A YHL049CP38722 271 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A COS4P43542 379 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A JHD2P47156 728 aaPredicted RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A RPL4BP49626 362 aaKnown RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A UFD1P53044 361 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A CTF19Q02732 369 aa3.47□□□□□ -1.85
YNL054W-AYNL054W-A ARC18Q05933 178 aaKnown RBP3.47□□□□□ -1.85
YNL054W-AYNL054W-A PHO80P20052 293 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A VPS3P23643 1011 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A SRB4P32569 687 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A YHL044WP38727 235 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A FRT2P39734 528 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A YIL054WP40524 105 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A SYS1P41544 203 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A COQ5P49017 307 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A YNL095CP53932 642 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A YMR166CQ03829 368 aa3.46□□□□□ -1.85
YNL054W-AYNL054W-A SGT2Q12118 346 aaKnown RBP3.46□□□□□ -1.85
YNL054W-AYNL054W-A FLO11P08640 1367 aa3.46□□□□□ -1.86
YNL054W-AYNL054W-A YMR316C-AI2HB70 103 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A RPS19AP07280 144 aaKnown RBP3.45□□□□□ -1.86
YNL054W-AYNL054W-A RPS19BP07281 144 aaPredicted RBP3.45□□□□□ -1.86
YNL054W-AYNL054W-A FUS3P16892 353 aaKnown RBP3.45□□□□□ -1.86
YNL054W-AYNL054W-A CAM1P29547 415 aaKnown RBP3.45□□□□□ -1.86
YNL054W-AYNL054W-A DOA4P32571 926 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A CAT2P32796 670 aaKnown RBP3.45□□□□□ -1.86
YNL054W-AYNL054W-A JEN1P36035 616 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A HMT1P38074 348 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A MRPS9P38120 278 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A BDH1P39714 382 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A AVT6P40074 448 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A RPC17P47076 161 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A CAX4P53223 239 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A YDR209CQ03480 137 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A SPO77Q06134 477 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A COQ10Q08058 207 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A RFM1Q12192 310 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A YPL119C-AQ3E751 87 aa3.45□□□□□ -1.86
YNL054W-AYNL054W-A OSM1P21375 501 aaKnown RBP3.44□□□□□ -1.86
YNL054W-AYNL054W-A YKT6P36015 200 aaKnown RBP3.44□□□□□ -1.86
YNL054W-AYNL054W-A YJR079WP47126 109 aa3.44□□□□□ -1.86
YNL054W-AYNL054W-A SMD1Q02260 146 aaPredicted RBP3.44□□□□□ -1.86
YNL054W-AYNL054W-A YCT1Q12235 531 aa3.44□□□□□ -1.86
YNL054W-AYNL054W-A ATG5Q12380 294 aa3.44□□□□□ -1.86
YNL054W-AYNL054W-A RPB4P20433 221 aaPredicted RBP3.44□□□□□ -1.86
YNL054W-AYNL054W-A PRE7P23724 241 aaKnown RBP3.44□□□□□ -1.86
YNL054W-AYNL054W-A YKL075CP36083 450 aa3.44□□□□□ -1.86
YNL054W-AYNL054W-A HEK2P38199 381 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms