RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MDY2Q12285 212 aa1.35□□□□□ -2.19
DDR48YMR173W GPI12P23797 304 aa1.34□□□□□ -2.19
DDR48YMR173W SUA5P32579 426 aa1.34□□□□□ -2.19
DDR48YMR173W HIS2P38635 335 aa1.34□□□□□ -2.19
DDR48YMR173W YHI9P38765 294 aa1.34□□□□□ -2.19
DDR48YMR173W SEN34P39707 275 aa1.34□□□□□ -2.19
DDR48YMR173W AGP3P43548 558 aa1.34□□□□□ -2.19
DDR48YMR173W YJL016WP47072 561 aa1.34□□□□□ -2.19
DDR48YMR173W COG7P53195 279 aa1.34□□□□□ -2.19
DDR48YMR173W SPO19Q03029 223 aa1.34□□□□□ -2.19
DDR48YMR173W YMR209CQ03648 457 aa1.34□□□□□ -2.19
DDR48YMR173W YML018CQ03730 393 aa1.34□□□□□ -2.19
DDR48YMR173W NOT5Q12514 560 aaPredicted RBP1.34□□□□□ -2.19
DDR48YMR173W ISD11Q6Q560 94 aa1.34□□□□□ -2.19
DDR48YMR173W UGA1P17649 471 aa1.33□□□□□ -2.2
DDR48YMR173W TOM40P23644 387 aaKnown RBP1.33□□□□□ -2.2
DDR48YMR173W ATG15P25641 520 aa1.33□□□□□ -2.2
DDR48YMR173W COT1P32798 439 aa1.33□□□□□ -2.2
DDR48YMR173W POP8P38208 133 aa1.33□□□□□ -2.2
DDR48YMR173W KEL2P50090 882 aa1.33□□□□□ -2.2
DDR48YMR173W CAB4P53332 305 aa1.33□□□□□ -2.2
DDR48YMR173W BER1Q06688 274 aaKnown RBP1.33□□□□□ -2.2
DDR48YMR173W POM33Q12164 279 aa1.33□□□□□ -2.2
DDR48YMR173W PAN1P32521 1480 aa1.32□□□□□ -2.2
DDR48YMR173W TDH1P00360 332 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W PET494P07390 489 aaPredicted RBP1.32□□□□□ -2.2
DDR48YMR173W CSM1P25651 190 aa1.32□□□□□ -2.2
DDR48YMR173W BMH1P29311 267 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W KRE6P32486 720 aa1.32□□□□□ -2.2
DDR48YMR173W CAT2P32796 670 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W EBP2P36049 427 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W PHO89P38361 574 aa1.32□□□□□ -2.2
DDR48YMR173W TDA11P38854 504 aa1.32□□□□□ -2.2
DDR48YMR173W TIF34P40217 347 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W YIA6P40556 373 aa1.32□□□□□ -2.2
DDR48YMR173W RPE1P46969 238 aa1.32□□□□□ -2.2
DDR48YMR173W YJL027CP47063 138 aaPredicted RBP1.32□□□□□ -2.2
DDR48YMR173W PNC1P53184 216 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W SLM2P53955 656 aa1.32□□□□□ -2.2
DDR48YMR173W ECM18Q04623 453 aa1.32□□□□□ -2.2
DDR48YMR173W TAF9Q05027 157 aa1.32□□□□□ -2.2
DDR48YMR173W BCP1Q06338 283 aa1.32□□□□□ -2.2
DDR48YMR173W GPN3Q06543 272 aa1.32□□□□□ -2.2
DDR48YMR173W NUP157P40064 1391 aaKnown RBP1.32□□□□□ -2.2
DDR48YMR173W ILV1P00927 576 aaKnown RBP1.31□□□□□ -2.2
DDR48YMR173W ERG2P32352 222 aa1.31□□□□□ -2.2
DDR48YMR173W YHL026CP38740 315 aa1.31□□□□□ -2.2
DDR48YMR173W GCD14P46959 383 aaPredicted RBP1.31□□□□□ -2.2
DDR48YMR173W IBA57P47158 497 aa1.31□□□□□ -2.2
DDR48YMR173W YNL260CP53846 198 aa1.31□□□□□ -2.2
DDR48YMR173W VPS60Q03390 229 aa1.31□□□□□ -2.2
DDR48YMR173W ERV41Q04651 352 aa1.31□□□□□ -2.2
DDR48YMR173W LOA1Q06508 300 aa1.31□□□□□ -2.2
DDR48YMR173W YPL150WQ12152 901 aa1.31□□□□□ -2.2
DDR48YMR173W YBL112CQ3E7Y4 105 aa1.31□□□□□ -2.2
DDR48YMR173W YEL009C-AA0A023PZF2 135 aa1.3□□□□□ -2.2
DDR48YMR173W FRS2P15625 503 aaKnown RBP1.3□□□□□ -2.2
DDR48YMR173W MEK1P24719 497 aaPredicted RBP1.3□□□□□ -2.2
DDR48YMR173W YOR062CP36025 268 aa1.3□□□□□ -2.2
DDR48YMR173W DRE2P36152 348 aa1.3□□□□□ -2.2
DDR48YMR173W MRPL40P36534 297 aa1.3□□□□□ -2.2
DDR48YMR173W YGL185CP53100 379 aa1.3□□□□□ -2.2
DDR48YMR173W CPD1P53314 239 aa1.3□□□□□ -2.2
DDR48YMR173W FMP41P53889 259 aaKnown RBP1.3□□□□□ -2.2
DDR48YMR173W ARP5P53946 755 aa1.3□□□□□ -2.2
DDR48YMR173W YPL039WQ03080 316 aa1.3□□□□□ -2.2
DDR48YMR173W YHR086W-AQ3E746 53 aa1.3□□□□□ -2.2
DDR48YMR173W YMR316C-AI2HB70 103 aa1.29□□□□□ -2.2
DDR48YMR173W YAL064W-BO13512 126 aa1.29□□□□□ -2.2
DDR48YMR173W RPS3P05750 240 aaKnown RBP1.29□□□□□ -2.2
DDR48YMR173W DBP3P20447 523 aaKnown RBP1.29□□□□□ -2.2
DDR48YMR173W CSG2P35206 410 aa1.29□□□□□ -2.2
DDR48YMR173W SPT8P38915 602 aa1.29□□□□□ -2.2
DDR48YMR173W PEX31P53203 462 aa1.29□□□□□ -2.2
DDR48YMR173W TRM44Q02648 567 aaKnown RBP1.29□□□□□ -2.2
DDR48YMR173W SDC1Q03323 175 aa1.29□□□□□ -2.2
DDR48YMR173W SMT3Q12306 101 aaKnown RBP1.29□□□□□ -2.2
DDR48YMR173W RAD10P06838 210 aa1.28□□□□□ -2.2
DDR48YMR173W RPC40P07703 335 aaKnown RBP1.28□□□□□ -2.2
DDR48YMR173W ICL1P28240 557 aaPredicted RBP1.28□□□□□ -2.2
DDR48YMR173W PEX3P28795 441 aa1.28□□□□□ -2.2
DDR48YMR173W CAM1P29547 415 aaKnown RBP1.28□□□□□ -2.2
DDR48YMR173W HMT1P38074 348 aa1.28□□□□□ -2.2
DDR48YMR173W ARN2P38724 620 aa1.28□□□□□ -2.2
DDR48YMR173W YFR054CP43622 192 aa1.28□□□□□ -2.2
DDR48YMR173W YNL050CP53952 270 aa1.28□□□□□ -2.2
DDR48YMR173W VBA1Q04301 562 aa1.28□□□□□ -2.2
DDR48YMR173W SFH1Q06168 426 aa1.28□□□□□ -2.2
DDR48YMR173W SEC10Q06245 871 aa1.28□□□□□ -2.2
DDR48YMR173W YLR413WQ06689 675 aa1.28□□□□□ -2.2
DDR48YMR173W YOL019WQ08157 551 aa1.28□□□□□ -2.2
DDR48YMR173W MRPL23Q12487 163 aaPredicted RBP1.28□□□□□ -2.2
DDR48YMR173W YIL002W-AQ3E7Z5 69 aa1.28□□□□□ -2.2
DDR48YMR173W COS2P0CX12 379 aa1.27□□□□□ -2.21
DDR48YMR173W COS3P0CX13 379 aa1.27□□□□□ -2.21
DDR48YMR173W YSR3P23501 404 aa1.27□□□□□ -2.21
DDR48YMR173W PPH21P23594 369 aa1.27□□□□□ -2.21
DDR48YMR173W RRF1P38771 230 aa1.27□□□□□ -2.21
DDR48YMR173W SER33P40510 469 aa1.27□□□□□ -2.21
DDR48YMR173W FMP33P46998 180 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms