RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W LSM2P38203 95 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W SKN7P38889 622 aa8.34□□□□□ -1.07
SFP1YLR403W HPA3P39979 161 aa8.34□□□□□ -1.07
SFP1YLR403W YEL057CP39983 233 aa8.34□□□□□ -1.07
SFP1YLR403W MOB1P40484 314 aa8.34□□□□□ -1.07
SFP1YLR403W YJL218WP40892 196 aaKnown RBP8.34□□□□□ -1.07
SFP1YLR403W VNX1P42839 908 aa8.34□□□□□ -1.07
SFP1YLR403W AAH1P53909 347 aa8.34□□□□□ -1.07
SFP1YLR403W YNL140CP53910 189 aa8.34□□□□□ -1.07
SFP1YLR403W YFL068WP0CX99 160 aa8.33□□□□□ -1.08
SFP1YLR403W YLL066W-AP0CY00 160 aa8.33□□□□□ -1.08
SFP1YLR403W YLL067W-AP0CY01 160 aa8.33□□□□□ -1.08
SFP1YLR403W NPR1P22211 790 aa8.33□□□□□ -1.08
SFP1YLR403W URK1P27515 501 aa8.33□□□□□ -1.08
SFP1YLR403W SYS1P41544 203 aa8.33□□□□□ -1.08
SFP1YLR403W OST3P48439 350 aa8.33□□□□□ -1.08
SFP1YLR403W GPI15P53961 229 aa8.33□□□□□ -1.08
SFP1YLR403W PKR1Q03880 122 aaKnown RBP8.33□□□□□ -1.08
SFP1YLR403W DOT1Q04089 582 aaKnown RBP8.33□□□□□ -1.08
SFP1YLR403W ECM22Q05958 814 aaPredicted RBP8.33□□□□□ -1.08
SFP1YLR403W YOL131WQ08270 108 aa8.33□□□□□ -1.08
SFP1YLR403W YOL159C-AQ3E769 90 aa8.33□□□□□ -1.08
SFP1YLR403W YCR023CP25351 611 aa8.33□□□□□ -1.08
SFP1YLR403W YCR061WP25639 631 aa8.33□□□□□ -1.08
SFP1YLR403W CLB6P32943 380 aa8.33□□□□□ -1.08
SFP1YLR403W YAL037WP39728 267 aa8.33□□□□□ -1.08
SFP1YLR403W HXT10P43581 546 aa8.33□□□□□ -1.08
SFP1YLR403W RIB4P50861 169 aaPredicted RBP8.33□□□□□ -1.08
SFP1YLR403W YGL235WP53071 178 aa8.33□□□□□ -1.08
SFP1YLR403W STR3P53101 465 aaKnown RBP8.33□□□□□ -1.08
SFP1YLR403W YMR210WQ03649 449 aa8.33□□□□□ -1.08
SFP1YLR403W YDR415CQ04033 374 aaPredicted RBP8.33□□□□□ -1.08
SFP1YLR403W MRPL1Q04599 285 aa8.33□□□□□ -1.08
SFP1YLR403W IRC13Q08630 104 aa8.33□□□□□ -1.08
SFP1YLR403W GPM2Q12008 311 aa8.33□□□□□ -1.08
SFP1YLR403W CTF3Q12748 733 aa8.33□□□□□ -1.08
SFP1YLR403W ADE4P04046 510 aaKnown RBP8.32□□□□□ -1.08
SFP1YLR403W RPL1AP0CX43 217 aaKnown RBP8.32□□□□□ -1.08
SFP1YLR403W RPL1BP0CX44 217 aaKnown RBP8.32□□□□□ -1.08
SFP1YLR403W VAC17P25591 423 aa8.32□□□□□ -1.08
SFP1YLR403W TAH1P25638 111 aaPredicted RBP8.32□□□□□ -1.08
SFP1YLR403W YBR071WP38243 211 aa8.32□□□□□ -1.08
SFP1YLR403W FLX1P40464 311 aa8.32□□□□□ -1.08
SFP1YLR403W LYS12P40495 371 aaKnown RBP8.32□□□□□ -1.08
SFP1YLR403W CHA4P43634 648 aa8.32□□□□□ -1.08
SFP1YLR403W EXG2P52911 562 aa8.32□□□□□ -1.08
SFP1YLR403W YIP4P53093 235 aa8.32□□□□□ -1.08
SFP1YLR403W YMR160WQ03823 816 aa8.32□□□□□ -1.08
SFP1YLR403W YLR271WQ06152 274 aa8.32□□□□□ -1.08
SFP1YLR403W YLR446WQ06204 433 aa8.32□□□□□ -1.08
SFP1YLR403W NAT5Q08689 176 aa8.32□□□□□ -1.08
SFP1YLR403W SLH1P53327 1967 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W PEP4P07267 405 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W AMD1P15274 810 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W EPT1P22140 391 aa8.31□□□□□ -1.08
SFP1YLR403W LSB5P25369 354 aa8.31□□□□□ -1.08
SFP1YLR403W SEC17P32602 292 aa8.31□□□□□ -1.08
SFP1YLR403W DAD2P36162 133 aa8.31□□□□□ -1.08
SFP1YLR403W LDH1P38139 375 aa8.31□□□□□ -1.08
SFP1YLR403W OYE3P41816 400 aaPredicted RBP8.31□□□□□ -1.08
SFP1YLR403W YJL007CP47080 104 aa8.31□□□□□ -1.08
SFP1YLR403W YGL138CP53122 345 aa8.31□□□□□ -1.08
SFP1YLR403W SKO1Q02100 647 aa8.31□□□□□ -1.08
SFP1YLR403W UGO1Q03327 502 aa8.31□□□□□ -1.08
SFP1YLR403W TRM12Q04235 462 aa8.31□□□□□ -1.08
SFP1YLR403W PAM18Q07914 168 aa8.31□□□□□ -1.08
SFP1YLR403W ALG6Q12001 544 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W SPT15P13393 240 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W SGF29P25554 259 aa8.31□□□□□ -1.08
SFP1YLR403W BUB2P26448 306 aaPredicted RBP8.31□□□□□ -1.08
SFP1YLR403W MIG1P27705 504 aa8.31□□□□□ -1.08
SFP1YLR403W TSL1P38427 1098 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W ERG28P40030 148 aa8.31□□□□□ -1.08
SFP1YLR403W SWM2P40342 146 aa8.31□□□□□ -1.08
SFP1YLR403W DIA3P52290 468 aa8.31□□□□□ -1.08
SFP1YLR403W DAD3P69850 94 aa8.31□□□□□ -1.08
SFP1YLR403W GPD1Q00055 391 aaKnown RBP8.31□□□□□ -1.08
SFP1YLR403W ANT1Q06497 328 aa8.31□□□□□ -1.08
SFP1YLR403W NBP2Q12163 236 aa8.31□□□□□ -1.08
SFP1YLR403W MES1P00958 751 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W GDH1P07262 454 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W GCY1P14065 312 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
SFP1YLR403W ART10P18634 518 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W ERG6P25087 383 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W YCP4P25349 247 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W MSK1P32048 576 aa8.3□□□□□ -1.08
SFP1YLR403W SFC1P33303 322 aa8.3□□□□□ -1.08
SFP1YLR403W ASH1P34233 588 aa8.3□□□□□ -1.08
SFP1YLR403W REG2P38232 338 aa8.3□□□□□ -1.08
SFP1YLR403W YHR097CP38809 366 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W IKS1P47042 667 aa8.3□□□□□ -1.08
SFP1YLR403W GTR2P53290 341 aa8.3□□□□□ -1.08
SFP1YLR403W YNR014WP53719 212 aa8.3□□□□□ -1.08
SFP1YLR403W FMP41P53889 259 aaKnown RBP8.3□□□□□ -1.08
SFP1YLR403W YLR030WQ07967 263 aa8.3□□□□□ -1.08
SFP1YLR403W IRC10Q08118 586 aa8.3□□□□□ -1.08
SFP1YLR403W MMT2Q08970 484 aa8.3□□□□□ -1.08
SFP1YLR403W RPL13AQ12690 199 aaPredicted RBP8.3□□□□□ -1.08
SFP1YLR403W TIR1P10863 254 aa8.3□□□□□ -1.08
SFP1YLR403W MEK1P24719 497 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms