RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C MPM1P40364 252 aa6.73□□□□□ -1.33
AFG2YLR397C GCV1P48015 400 aa6.73□□□□□ -1.33
AFG2YLR397C PNC1P53184 216 aaKnown RBP6.73□□□□□ -1.33
AFG2YLR397C YNR061CP53747 219 aa6.73□□□□□ -1.33
AFG2YLR397C ADH6Q04894 360 aaKnown RBP6.73□□□□□ -1.33
AFG2YLR397C SUE1Q06524 206 aa6.73□□□□□ -1.33
AFG2YLR397C YLR036CQ07986 203 aa6.73□□□□□ -1.33
AFG2YLR397C BTS1Q12051 335 aa6.73□□□□□ -1.33
AFG2YLR397C SGF29P25554 259 aa6.73□□□□□ -1.33
AFG2YLR397C FEN2P25621 512 aaKnown RBP6.73□□□□□ -1.33
AFG2YLR397C DBP8P38719 431 aa6.73□□□□□ -1.33
AFG2YLR397C MET30P39014 640 aa6.73□□□□□ -1.33
AFG2YLR397C YEL057CP39983 233 aa6.73□□□□□ -1.33
AFG2YLR397C YIL060WP40519 144 aa6.73□□□□□ -1.33
AFG2YLR397C YGR149WP48236 432 aa6.73□□□□□ -1.33
AFG2YLR397C TIM21P53220 239 aa6.73□□□□□ -1.33
AFG2YLR397C AAT1Q01802 451 aa6.73□□□□□ -1.33
AFG2YLR397C MET14Q02196 202 aa6.73□□□□□ -1.33
AFG2YLR397C DAL4Q04895 635 aa6.73□□□□□ -1.33
AFG2YLR397C DCI1Q08558 271 aa6.73□□□□□ -1.33
AFG2YLR397C UBX3Q12229 455 aa6.73□□□□□ -1.33
AFG2YLR397C YCR075W-AQ3E830 75 aa6.73□□□□□ -1.33
AFG2YLR397C ECM29P38737 1868 aa6.72□□□□□ -1.33
AFG2YLR397C SIR2P06700 562 aa6.72□□□□□ -1.33
AFG2YLR397C PRE8P23639 250 aa6.72□□□□□ -1.33
AFG2YLR397C BOS1P25385 244 aa6.72□□□□□ -1.33
AFG2YLR397C POT1P27796 417 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
AFG2YLR397C PPG1P32838 368 aa6.72□□□□□ -1.33
AFG2YLR397C PHD1P36093 366 aa6.72□□□□□ -1.33
AFG2YLR397C MRPS9P38120 278 aa6.72□□□□□ -1.33
AFG2YLR397C SPO73P40031 143 aa6.72□□□□□ -1.33
AFG2YLR397C PRE6P40303 254 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C LYS12P40495 371 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C CAT5P41735 233 aa6.72□□□□□ -1.33
AFG2YLR397C ERG25P53045 309 aa6.72□□□□□ -1.33
AFG2YLR397C YIP4P53093 235 aa6.72□□□□□ -1.33
AFG2YLR397C YGL101WP53144 215 aa6.72□□□□□ -1.33
AFG2YLR397C CTF19Q02732 369 aa6.72□□□□□ -1.33
AFG2YLR397C PRR2Q12310 699 aa6.72□□□□□ -1.33
AFG2YLR397C SRD1P09007 221 aa6.72□□□□□ -1.33
AFG2YLR397C YPR170W-BP0C5R9 85 aa6.72□□□□□ -1.33
AFG2YLR397C SCL1P21243 252 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C YIH1P25637 258 aa6.72□□□□□ -1.33
AFG2YLR397C RIB1P38066 345 aa6.72□□□□□ -1.33
AFG2YLR397C TSL1P38427 1098 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C BAT1P38891 393 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C SNU13P39990 126 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C KTR7P40504 517 aa6.72□□□□□ -1.33
AFG2YLR397C RPN11P43588 306 aaKnown RBP6.72□□□□□ -1.33
AFG2YLR397C GTR2P53290 341 aa6.72□□□□□ -1.33
AFG2YLR397C RSM23Q01163 450 aa6.72□□□□□ -1.33
AFG2YLR397C YLR049CQ12110 428 aa6.72□□□□□ -1.33
AFG2YLR397C HTS1P07263 546 aaKnown RBP6.71□□□□□ -1.33
AFG2YLR397C NHP6AP11632 93 aaKnown RBP6.71□□□□□ -1.33
AFG2YLR397C EXG1P23776 448 aaKnown RBP6.71□□□□□ -1.33
AFG2YLR397C SLM5P25345 492 aaKnown RBP6.71□□□□□ -1.33
AFG2YLR397C SFK1P35735 353 aa6.71□□□□□ -1.33
AFG2YLR397C NDT80P38830 627 aa6.71□□□□□ -1.33
AFG2YLR397C WSS1P38838 269 aa6.71□□□□□ -1.33
AFG2YLR397C PFS1P38872 237 aa6.71□□□□□ -1.33
AFG2YLR397C CHL4P38907 458 aa6.71□□□□□ -1.33
AFG2YLR397C ASP1P38986 381 aaPredicted RBP6.71□□□□□ -1.33
AFG2YLR397C RRG9P40156 214 aa6.71□□□□□ -1.33
AFG2YLR397C EMC5P40540 141 aa6.71□□□□□ -1.33
AFG2YLR397C POP1P41812 875 aa6.71□□□□□ -1.33
AFG2YLR397C SET4P42948 560 aa6.71□□□□□ -1.33
AFG2YLR397C RIM15P43565 1770 aa6.71□□□□□ -1.33
AFG2YLR397C PHB2P50085 310 aa6.71□□□□□ -1.33
AFG2YLR397C POS5Q06892 414 aa6.71□□□□□ -1.33
AFG2YLR397C YLR030WQ07967 263 aa6.71□□□□□ -1.33
AFG2YLR397C FRE7Q12333 620 aa6.71□□□□□ -1.33
AFG2YLR397C SNF8Q12483 233 aa6.71□□□□□ -1.33
AFG2YLR397C ADE4P04046 510 aaKnown RBP6.71□□□□□ -1.34
AFG2YLR397C ADK1P07170 222 aaKnown RBP6.71□□□□□ -1.34
AFG2YLR397C YML003WP0CF16 290 aa6.71□□□□□ -1.34
AFG2YLR397C TRS65P32893 560 aa6.71□□□□□ -1.34
AFG2YLR397C SPT23P35210 1082 aa6.71□□□□□ -1.34
AFG2YLR397C NPY1P53164 384 aa6.71□□□□□ -1.34
AFG2YLR397C MTL1P53214 551 aa6.71□□□□□ -1.34
AFG2YLR397C HPT1Q04178 221 aaKnown RBP6.71□□□□□ -1.34
AFG2YLR397C TY1A-MR1Q04215 440 aa6.71□□□□□ -1.34
AFG2YLR397C VBA4Q04602 768 aaKnown RBP6.71□□□□□ -1.34
AFG2YLR397C LDS2Q08218 356 aa6.71□□□□□ -1.34
AFG2YLR397C MES1P00958 751 aaKnown RBP6.7□□□□□ -1.34
AFG2YLR397C CPA1P07258 411 aaKnown RBP6.7□□□□□ -1.34
AFG2YLR397C YOX1P34161 385 aa6.7□□□□□ -1.34
AFG2YLR397C TGL1P34163 548 aa6.7□□□□□ -1.34
AFG2YLR397C LDH1P38139 375 aa6.7□□□□□ -1.34
AFG2YLR397C VAC8P39968 578 aa6.7□□□□□ -1.34
AFG2YLR397C OSW5P40219 148 aa6.7□□□□□ -1.34
AFG2YLR397C COS10P52924 374 aa6.7□□□□□ -1.34
AFG2YLR397C YIF1P53845 314 aaKnown RBP6.7□□□□□ -1.34
AFG2YLR397C DYN2Q02647 92 aa6.7□□□□□ -1.34
AFG2YLR397C COQ10Q08058 207 aa6.7□□□□□ -1.34
AFG2YLR397C FCF2Q12035 217 aaPredicted RBP6.7□□□□□ -1.34
AFG2YLR397C TY1A-BLQ12266 440 aa6.7□□□□□ -1.34
AFG2YLR397C YOS1Q3E834 85 aa6.7□□□□□ -1.34
AFG2YLR397C HIS1P00498 297 aaKnown RBP6.7□□□□□ -1.34
AFG2YLR397C AIM26P32858 118 aa6.7□□□□□ -1.34
AFG2YLR397C LDB7P38210 180 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 183.7 ms