RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C OST6Q03723 332 aa1.86□□□□□ -2.11
ATG38YLR211C GMC2Q06201 188 aa1.86□□□□□ -2.11
ATG38YLR211C BER1Q06688 274 aaKnown RBP1.86□□□□□ -2.11
ATG38YLR211C ASR1Q06834 288 aa1.86□□□□□ -2.11
ATG38YLR211C ATG31Q12421 196 aa1.86□□□□□ -2.11
ATG38YLR211C MRX4Q12467 430 aa1.86□□□□□ -2.11
ATG38YLR211C MEI5P32489 222 aa1.85□□□□□ -2.11
ATG38YLR211C YFL040WP43562 540 aa1.85□□□□□ -2.11
ATG38YLR211C YAR1P46683 200 aa1.85□□□□□ -2.11
ATG38YLR211C ATG38Q05789 226 aaKnown RBP1.85□□□□□ -2.11
ATG38YLR211C PAM18Q07914 168 aa1.85□□□□□ -2.11
ATG38YLR211C SDO1Q07953 250 aaKnown RBP1.85□□□□□ -2.11
ATG38YLR211C RPL31AP0C2H8 113 aaKnown RBP1.84□□□□□ -2.11
ATG38YLR211C MRP1P10662 321 aaKnown RBP1.84□□□□□ -2.11
ATG38YLR211C ERD1P16151 362 aa1.84□□□□□ -2.11
ATG38YLR211C MET16P18408 261 aaPredicted RBP1.84□□□□□ -2.11
ATG38YLR211C DAL82P21705 255 aa1.84□□□□□ -2.11
ATG38YLR211C MRPL25P23369 157 aa1.84□□□□□ -2.11
ATG38YLR211C RRT12P25381 491 aa1.84□□□□□ -2.11
ATG38YLR211C RAD51P25454 400 aa1.84□□□□□ -2.11
ATG38YLR211C SRB4P32569 687 aa1.84□□□□□ -2.11
ATG38YLR211C YKL063CP35725 167 aa1.84□□□□□ -2.11
ATG38YLR211C LDB7P38210 180 aa1.84□□□□□ -2.11
ATG38YLR211C YPC1P38298 316 aa1.84□□□□□ -2.11
ATG38YLR211C SIP3P38717 1229 aa1.84□□□□□ -2.11
ATG38YLR211C YHR035WP38769 630 aa1.84□□□□□ -2.11
ATG38YLR211C TDA11P38854 504 aa1.84□□□□□ -2.11
ATG38YLR211C EDC2P40023 145 aaPredicted RBP1.84□□□□□ -2.11
ATG38YLR211C YER188WP40103 239 aa1.84□□□□□ -2.11
ATG38YLR211C OTU1P43558 301 aa1.84□□□□□ -2.11
ATG38YLR211C NBP1P52919 319 aaPredicted RBP1.84□□□□□ -2.11
ATG38YLR211C CGR1P53188 120 aa1.84□□□□□ -2.11
ATG38YLR211C CPD1P53314 239 aa1.84□□□□□ -2.11
ATG38YLR211C GIM3P53900 129 aa1.84□□□□□ -2.11
ATG38YLR211C PGA2P53903 129 aa1.84□□□□□ -2.11
ATG38YLR211C YNL095CP53932 642 aa1.84□□□□□ -2.11
ATG38YLR211C CDC14Q00684 551 aa1.84□□□□□ -2.11
ATG38YLR211C SNX41Q04053 625 aa1.84□□□□□ -2.11
ATG38YLR211C PEX30Q06169 523 aa1.84□□□□□ -2.11
ATG38YLR211C CDD1Q06549 142 aa1.84□□□□□ -2.11
ATG38YLR211C YLR012CQ07927 99 aa1.84□□□□□ -2.11
ATG38YLR211C YAL063C-AQ3E791 96 aa1.84□□□□□ -2.11
ATG38YLR211C ATP6P00854 259 aa1.83□□□□□ -2.12
ATG38YLR211C ILV1P00927 576 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C RHO1P06780 209 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C MGM101P32787 269 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C PRS4P38063 326 aaPredicted RBP1.83□□□□□ -2.12
ATG38YLR211C YBR062CP38239 180 aa1.83□□□□□ -2.12
ATG38YLR211C GDS1P41913 522 aa1.83□□□□□ -2.12
ATG38YLR211C RAD17P48581 401 aa1.83□□□□□ -2.12
ATG38YLR211C NOP13P53883 403 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
ATG38YLR211C ALG11P53954 548 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C VBA1Q04301 562 aa1.83□□□□□ -2.12
ATG38YLR211C ADH6Q04894 360 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C TAZ1Q06510 381 aa1.83□□□□□ -2.12
ATG38YLR211C DTD1Q07648 150 aaKnown RBP1.83□□□□□ -2.12
ATG38YLR211C YOR292CQ08743 309 aa1.83□□□□□ -2.12
ATG38YLR211C MSH5Q12175 901 aa1.83□□□□□ -2.12
ATG38YLR211C IZH4Q99393 312 aa1.83□□□□□ -2.12
ATG38YLR211C HIS1P00498 297 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C TCP1P12612 559 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C POF1P25576 258 aa1.82□□□□□ -2.12
ATG38YLR211C RPL16BP26785 198 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C PPA2P28239 310 aa1.82□□□□□ -2.12
ATG38YLR211C MRPL6P32904 214 aa1.82□□□□□ -2.12
ATG38YLR211C CSE1P33307 960 aa1.82□□□□□ -2.12
ATG38YLR211C GPX1P36014 167 aa1.82□□□□□ -2.12
ATG38YLR211C RPC37P36121 282 aa1.82□□□□□ -2.12
ATG38YLR211C YGP1P38616 354 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C YIA6P40556 373 aa1.82□□□□□ -2.12
ATG38YLR211C SWC4P53201 476 aa1.82□□□□□ -2.12
ATG38YLR211C MRPL50P53724 139 aa1.82□□□□□ -2.12
ATG38YLR211C OSH6Q02201 448 aa1.82□□□□□ -2.12
ATG38YLR211C YPL077CQ02831 240 aa1.82□□□□□ -2.12
ATG38YLR211C SSQ1Q05931 657 aaPredicted RBP1.82□□□□□ -2.12
ATG38YLR211C YPL245WQ12179 454 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C UTP23Q12339 254 aaKnown RBP1.82□□□□□ -2.12
ATG38YLR211C SNF8Q12483 233 aa1.82□□□□□ -2.12
ATG38YLR211C YOL163WP0CF20 169 aa1.81□□□□□ -2.12
ATG38YLR211C NHP6BP11633 99 aaKnown RBP1.81□□□□□ -2.12
ATG38YLR211C YAK1P14680 807 aa1.81□□□□□ -2.12
ATG38YLR211C RPS5P26783 225 aaKnown RBP1.81□□□□□ -2.12
ATG38YLR211C RME1P32338 300 aaKnown RBP1.81□□□□□ -2.12
ATG38YLR211C ASF2P32448 525 aaPredicted RBP1.81□□□□□ -2.12
ATG38YLR211C SPT4P32914 102 aaPredicted RBP1.81□□□□□ -2.12
ATG38YLR211C MAL32P38158 584 aa1.81□□□□□ -2.12
ATG38YLR211C MIC12P38341 106 aa1.81□□□□□ -2.12
ATG38YLR211C SOP4P39543 234 aaPredicted RBP1.81□□□□□ -2.12
ATG38YLR211C YER034WP40022 185 aaKnown RBP1.81□□□□□ -2.12
ATG38YLR211C TAD2P47058 250 aa1.81□□□□□ -2.12
ATG38YLR211C PEX31P53203 462 aa1.81□□□□□ -2.12
ATG38YLR211C MAL12P53341 584 aa1.81□□□□□ -2.12
ATG38YLR211C YDR209CQ03480 137 aa1.81□□□□□ -2.12
ATG38YLR211C SEC13Q04491 297 aaKnown RBP1.81□□□□□ -2.12
ATG38YLR211C YLR283WQ05867 314 aa1.81□□□□□ -2.12
ATG38YLR211C RRP42Q12277 265 aaPredicted RBP1.81□□□□□ -2.12
ATG38YLR211C THP2O13539 261 aaKnown RBP1.8□□□□□ -2.12
ATG38YLR211C QCR6P00127 147 aa1.8□□□□□ -2.12
ATG38YLR211C TFS1P14306 219 aa1.8□□□□□ -2.12
ATG38YLR211C COQ1P18900 473 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms