RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W SOK2P53438 785 aaPredicted RBP8.8□□□□□ -1
SHH4YLR164W NNT1Q05874 261 aa8.8□□□□□ -1
SHH4YLR164W TSR2Q06672 205 aaKnown RBP8.8□□□□□ -1
SHH4YLR164W RTN2Q12443 393 aa8.8□□□□□ -1
SHH4YLR164W QCR7P00128 127 aa8.79□□□□□ -1
SHH4YLR164W SGA1P08019 549 aa8.79□□□□□ -1
SHH4YLR164W PRB1P09232 635 aa8.79□□□□□ -1
SHH4YLR164W RPB10P22139 70 aa8.79□□□□□ -1
SHH4YLR164W HOM6P31116 359 aaKnown RBP8.79□□□□□ -1
SHH4YLR164W SFK1P35735 353 aa8.79□□□□□ -1
SHH4YLR164W CIN2P46670 268 aa8.79□□□□□ -1
SHH4YLR164W IRC18P47056 224 aa8.79□□□□□ -1
SHH4YLR164W SUR7P54003 302 aa8.79□□□□□ -1
SHH4YLR164W BUD25P85052 153 aa8.79□□□□□ -1
SHH4YLR164W HRI1Q05905 244 aaKnown RBP8.79□□□□□ -1
SHH4YLR164W SFG1Q12507 346 aa8.79□□□□□ -1
SHH4YLR164W RPS16AP0CX51 143 aaKnown RBP8.78□□□□□ -1
SHH4YLR164W RPS16BP0CX52 143 aaKnown RBP8.78□□□□□ -1
SHH4YLR164W SED4P25365 1065 aa8.78□□□□□ -1
SHH4YLR164W ATG15P25641 520 aa8.78□□□□□ -1
SHH4YLR164W PRE4P30657 266 aa8.78□□□□□ -1
SHH4YLR164W SEC66P33754 206 aa8.78□□□□□ -1
SHH4YLR164W MSS4P38994 779 aa8.78□□□□□ -1
SHH4YLR164W YJL055WP47044 245 aa8.78□□□□□ -1
SHH4YLR164W TDA1Q03533 586 aa8.78□□□□□ -1
SHH4YLR164W TPO3Q06451 622 aa8.78□□□□□ -1
SHH4YLR164W SEC16P48415 2195 aaKnown RBP8.78□□□□□ -1
SHH4YLR164W BLM10P43583 2143 aa8.77□□□□□ -1.01
SHH4YLR164W COX5BP00425 151 aa8.77□□□□□ -1.01
SHH4YLR164W MSW1P04803 379 aa8.77□□□□□ -1.01
SHH4YLR164W SPO7P18410 259 aa8.77□□□□□ -1.01
SHH4YLR164W MTC7P32633 139 aa8.77□□□□□ -1.01
SHH4YLR164W HTD2P38790 280 aaKnown RBP8.77□□□□□ -1.01
SHH4YLR164W DPB11P47027 764 aaPredicted RBP8.77□□□□□ -1.01
SHH4YLR164W YLR152CP54072 576 aa8.77□□□□□ -1.01
SHH4YLR164W RSM28Q03430 361 aa8.77□□□□□ -1.01
SHH4YLR164W YOR283WQ12040 230 aaKnown RBP8.77□□□□□ -1.01
SHH4YLR164W INP53Q12271 1107 aa8.77□□□□□ -1.01
SHH4YLR164W PUP1P25043 261 aa8.76□□□□□ -1.01
SHH4YLR164W CNE1P27825 502 aa8.76□□□□□ -1.01
SHH4YLR164W RIB7P33312 244 aa8.76□□□□□ -1.01
SHH4YLR164W PHB2P50085 310 aa8.76□□□□□ -1.01
SHH4YLR164W RPN14P53196 417 aa8.76□□□□□ -1.01
SHH4YLR164W FMP48P53233 369 aa8.76□□□□□ -1.01
SHH4YLR164W YNL165WP53891 406 aa8.76□□□□□ -1.01
SHH4YLR164W SAM50P53969 484 aa8.76□□□□□ -1.01
SHH4YLR164W YKR005CQ02203 525 aa8.76□□□□□ -1.01
SHH4YLR164W PEX10Q05568 337 aa8.76□□□□□ -1.01
SHH4YLR164W YDL218WQ07629 317 aa8.76□□□□□ -1.01
SHH4YLR164W YDL180WQ12301 547 aa8.76□□□□□ -1.01
SHH4YLR164W ORT1Q12375 292 aa8.76□□□□□ -1.01
SHH4YLR164W FRM2P37261 193 aa8.75□□□□□ -1.01
SHH4YLR164W HPA3P39979 161 aa8.75□□□□□ -1.01
SHH4YLR164W SLZ1P40167 298 aa8.75□□□□□ -1.01
SHH4YLR164W ATF1P40353 525 aa8.75□□□□□ -1.01
SHH4YLR164W NIT3P49954 291 aa8.75□□□□□ -1.01
SHH4YLR164W MCT1Q12283 360 aa8.75□□□□□ -1.01
SHH4YLR164W MES1P00958 751 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W SCEIP03882 235 aa8.74□□□□□ -1.01
SHH4YLR164W FUR4P05316 633 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W PDA1P16387 420 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W ITR1P30605 584 aa8.74□□□□□ -1.01
SHH4YLR164W MRPS5P33759 307 aa8.74□□□□□ -1.01
SHH4YLR164W MRPL39P36533 70 aa8.74□□□□□ -1.01
SHH4YLR164W TAT1P38085 619 aa8.74□□□□□ -1.01
SHH4YLR164W PUG1P40100 303 aa8.74□□□□□ -1.01
SHH4YLR164W YKE4P40544 346 aa8.74□□□□□ -1.01
SHH4YLR164W BUD8P41698 603 aa8.74□□□□□ -1.01
SHH4YLR164W LOH1P47055 219 aa8.74□□□□□ -1.01
SHH4YLR164W SRP1Q02821 542 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W RGC1Q06108 1083 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W RTC5Q12108 567 aaKnown RBP8.74□□□□□ -1.01
SHH4YLR164W FOL3Q12676 427 aaPredicted RBP8.74□□□□□ -1.01
SHH4YLR164W CYC1P00044 109 aaPredicted RBP8.73□□□□□ -1.01
SHH4YLR164W CUP1-1P0CX80 61 aa8.73□□□□□ -1.01
SHH4YLR164W CUP1-2P0CX81 61 aa8.73□□□□□ -1.01
SHH4YLR164W MATALPHA1P0CY06 175 aa8.73□□□□□ -1.01
SHH4YLR164W HMLALPHA1P0CY07 175 aa8.73□□□□□ -1.01
SHH4YLR164W PPG1P32838 368 aa8.73□□□□□ -1.01
SHH4YLR164W SSH1P38353 490 aaKnown RBP8.73□□□□□ -1.01
SHH4YLR164W DLS1P40366 167 aa8.73□□□□□ -1.01
SHH4YLR164W YIL060WP40519 144 aa8.73□□□□□ -1.01
SHH4YLR164W AAD14P42884 376 aa8.73□□□□□ -1.01
SHH4YLR164W CTK2P46962 323 aa8.73□□□□□ -1.01
SHH4YLR164W PXR1P53335 271 aaPredicted RBP8.73□□□□□ -1.01
SHH4YLR164W ELA1P53861 379 aaPredicted RBP8.73□□□□□ -1.01
SHH4YLR164W AAH1P53909 347 aa8.73□□□□□ -1.01
SHH4YLR164W YAP6Q03935 383 aa8.73□□□□□ -1.01
SHH4YLR164W PHO92Q06390 306 aa8.73□□□□□ -1.01
SHH4YLR164W LUC7Q07508 261 aaPredicted RBP8.73□□□□□ -1.01
SHH4YLR164W PRS5Q12265 496 aaKnown RBP8.73□□□□□ -1.01
SHH4YLR164W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
SHH4YLR164W CAP2P13517 287 aa8.72□□□□□ -1.01
SHH4YLR164W YMR262WP38430 313 aa8.72□□□□□ -1.01
SHH4YLR164W AIM20P40451 204 aa8.72□□□□□ -1.01
SHH4YLR164W MSE1P48525 536 aa8.72□□□□□ -1.01
SHH4YLR164W ARO8P53090 500 aaKnown RBP8.72□□□□□ -1.01
SHH4YLR164W TPN1P53099 579 aa8.72□□□□□ -1.01
SHH4YLR164W VHT1P53241 593 aa8.72□□□□□ -1.01
SHH4YLR164W TNA1P53322 534 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms