RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	BDH1	P39714	382 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	OPT1	P40897	799 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	PAM16	P42949	149 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	AVT1	P47082	602 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	IBA57	P47158	497 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	YGR283C	P53336	341 aa	Predicted RBP	4.41	□□□□□ -1.7
CLF1	YLR117C	YIF1	P53845	314 aa	Known RBP	4.41	□□□□□ -1.7
CLF1	YLR117C	UPS3	Q04006	179 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	PEX30	Q06169	523 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	NOC4	Q06512	552 aa	Predicted RBP	4.41	□□□□□ -1.7
CLF1	YLR117C	ATG10	Q07879	167 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	CSI2	Q08054	341 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	COQ10	Q08058	207 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	ISU2	Q12056	156 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
CLF1	YLR117C	TRM13	Q12383	476 aa		4.41	□□□□□ -1.7
CLF1	YLR117C	HIS1	P00498	297 aa	Known RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	STF1	P01098	86 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	RPS9B	P05755	195 aa	Known RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	RPS25B	P0C0T4	108 aa	Known RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	EMC3	P36039	253 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	OMA1	P36163	345 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	SHE1	P38200	338 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	YPC1	P38298	316 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	AME1	P38313	324 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	MNL1	P38888	796 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	ELO3	P40319	345 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	YAR1	P46683	200 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	NNF1	P47149	201 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	SKP1	P52286	194 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	EXG2	P52911	562 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	MGA1	P53050	456 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	BOL2	P53082	120 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	NCS6	P53088	359 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	FLC3	P53121	802 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	PEX31	P53203	462 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	RSM23	Q01163	450 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	DFG5	Q05031	458 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	ATG39	Q06159	398 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	YLR455W	Q06188	304 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	KEI1	Q06346	221 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	LEA1	Q08963	238 aa	Predicted RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	YLR118C	Q12354	227 aa		4.4	□□□□□ -1.71
CLF1	YLR117C	TIF6	Q12522	245 aa	Known RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	RPS25A	Q3E792	108 aa	Predicted RBP	4.4	□□□□□ -1.71
CLF1	YLR117C	CDC9	P04819	755 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	NHP6A	P11632	93 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	ELO2	P25358	347 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	LSB5	P25369	354 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	BOS1	P25385	244 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	VBA3	P25594	458 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
CLF1	YLR117C	PPG1	P32838	368 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	MTH1	P35198	433 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	YPT53	P36019	220 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	CHL4	P38907	458 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	YER158C	P40095	573 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	MET28	P40573	187 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	YVH1	Q02256	364 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	OAZ1	Q02803	292 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	EST3	Q03096	181 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	CGI121	Q03705	181 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	TY1A-DR2	Q03964	440 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	GSF2	Q04697	403 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	ERP1	Q05359	219 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	BLS1	Q06071	122 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	CTS2	Q06350	511 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	BER1	Q06688	274 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	BTS1	Q12051	335 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	RDL1	Q12305	139 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	SLO1	Q3E784	85 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	INH1	P01097	85 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	GDH1	P07262	454 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	PDA1	P16387	420 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	ADH7	P25377	361 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	STP22	P25604	385 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	TIP1	P27654	210 aa	Predicted RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	POP5	P28005	173 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	ARO2	P28777	376 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	HMX1	P32339	317 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	AAR2	P32357	355 aa	Predicted RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	COT1	P32798	439 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	PRY2	P36110	329 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	LYS12	P40495	371 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	QRI7	P43122	407 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	ATF2	P53296	535 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	APJ1	P53940	528 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	IRC15	Q02733	499 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	YPL080C	Q02826	108 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	GOT1	Q03554	138 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	PKR1	Q03880	122 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	TY1A-MR1	Q04215	440 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	UTP15	Q04305	513 aa	Known RBP	4.39	□□□□□ -1.71
CLF1	YLR117C	CRF1	Q04930	467 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	CTR3	Q06686	241 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	HRD1	Q08109	551 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	NAT5	Q08689	176 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	TY1A-BL	Q12266	440 aa		4.39	□□□□□ -1.71
CLF1	YLR117C	PHO2	P07269	559 aa		4.38	□□□□□ -1.71
CLF1	YLR117C	YPR170W-B	P0C5R9	85 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms