RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASH1	YKL185W	OCA1	P50946	238 aa	Predicted RBP	5.07	□□□□□ -1.6
ASH1	YKL185W	PEX25	Q02969	394 aa		5.07	□□□□□ -1.6
ASH1	YKL185W	CTL1	Q03220	320 aa	Known RBP	5.07	□□□□□ -1.6
ASH1	YKL185W	MHR1	Q06630	226 aa		5.07	□□□□□ -1.6
ASH1	YKL185W	TFB5	Q3E7C1	72 aa	Predicted RBP	5.07	□□□□□ -1.6
ASH1	YKL185W	MSB2	P32334	1306 aa		5.07	□□□□□ -1.6
ASH1	YKL185W	UBI4	P0CG63	381 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	RPL40A	P0CH08	128 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	RPL40B	P0CH09	128 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	YPK2	P18961	677 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	MSK1	P32048	576 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	RPD3	P32561	433 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	YEF1	P32622	495 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	DOA1	P36037	715 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	MET30	P39014	640 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	EMC5	P40540	141 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	TAX4	P47030	604 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	YJR141W	P47172	347 aa	Predicted RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	NPY1	P53164	384 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	TYW3	P53177	273 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	ERG26	P53199	349 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	ART5	P53244	586 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	RHO4	Q00246	291 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	SEN15	Q04675	128 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	ROY1	Q04847	553 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	RSF1	Q05043	376 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	YOR365C	Q08844	703 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	VPS68	Q12016	184 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	YKL033W-A	Q86ZR7	236 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	FAB1	P34756	2278 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	STE7	P06784	515 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	BUB3	P26449	341 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	SCM4	P32564	187 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	COS9	P36034	407 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	SRP102	P36057	244 aa	Predicted RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	PAN3	P36102	679 aa	Predicted RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	ECM34	P38728	170 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	YHR097C	P38809	366 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	LSM4	P40070	187 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	PUG1	P40100	303 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	NIT2	P47016	307 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	AIM24	P47127	394 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	DAN1	P47178	298 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	PKP2	P53170	491 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	CDH1	P53197	566 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	OCA2	P53949	197 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	GPI15	P53961	229 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	BUD25	P85052	153 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	REC102	Q02721	264 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	TPP1	Q03796	238 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	BER1	Q06688	274 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	SDO1	Q07953	250 aa	Known RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	FCF2	Q12035	217 aa	Predicted RBP	5.06	□□□□□ -1.6
ASH1	YKL185W	PUS9	Q12069	462 aa		5.06	□□□□□ -1.6
ASH1	YKL185W	MGR1	P25573	417 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	AIM3	P38266	947 aa	Known RBP	5.05	□□□□□ -1.6
ASH1	YKL185W	YEL068C	P39977	110 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	PIG2	P40187	538 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	RTS2	P40962	232 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	SAM37	P50110	327 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	SOL1	P50278	321 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	YGL101W	P53144	215 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	ERV14	P53173	138 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	AQR1	P53943	586 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	YPL108W	Q02872	168 aa	Predicted RBP	5.05	□□□□□ -1.6
ASH1	YKL185W	YHM2	Q04013	314 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	NAT4	Q04751	285 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	YMR310C	Q04867	317 aa	Predicted RBP	5.05	□□□□□ -1.6
ASH1	YKL185W	YOR385W	Q08909	290 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	YOR114W	Q12219	294 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	YIL002W-A	Q3E7Z5	69 aa		5.05	□□□□□ -1.6
ASH1	YKL185W	PNO1	Q99216	274 aa	Known RBP	5.05	□□□□□ -1.6
ASH1	YKL185W	INH1	P01097	85 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	AI1	P03875	834 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	COX9	P07255	59 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	YML003W	P0CF16	290 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	DPM1	P14020	267 aa	Known RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	FPR1	P20081	114 aa	Known RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	SFA1	P32771	386 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	CPR5	P35176	225 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	SDH4	P37298	181 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	MAL32	P38158	584 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	OCA5	P38738	679 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	YNL195C	P40168	261 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	OSW5	P40219	148 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	TOK1	P40310	691 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	YIL060W	P40519	144 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	MNT3	P40549	630 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	OTU1	P43558	301 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	LYS20	P48570	428 aa	Known RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	UBC9	P50623	157 aa	Predicted RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	PNC1	P53184	216 aa	Known RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	MAL12	P53341	584 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	EST3	Q03096	181 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	TAZ1	Q06510	381 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	LUC7	Q07508	261 aa	Predicted RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	PFA4	Q12006	378 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	TPI1	P00942	248 aa	Known RBP	5.04	□□□□□ -1.6
ASH1	YKL185W	CDC7	P06243	507 aa		5.04	□□□□□ -1.6
ASH1	YKL185W	NFS1	P25374	497 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms