RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W PDR11P40550 1411 aa4.58□□□□□ -1.68
PRP40YKL012W MMS1Q06211 1407 aa4.58□□□□□ -1.68
PRP40YKL012W AEP1P32493 518 aa4.58□□□□□ -1.68
PRP40YKL012W BMH2P34730 273 aaKnown RBP4.58□□□□□ -1.68
PRP40YKL012W GPX1P36014 167 aa4.58□□□□□ -1.68
PRP40YKL012W YBR062CP38239 180 aa4.58□□□□□ -1.68
PRP40YKL012W PRS2P38620 318 aaKnown RBP4.58□□□□□ -1.68
PRP40YKL012W IBA57P47158 497 aa4.58□□□□□ -1.68
PRP40YKL012W MRPL50P53724 139 aa4.58□□□□□ -1.68
PRP40YKL012W INP2Q03824 705 aa4.58□□□□□ -1.68
PRP40YKL012W YOR292CQ08743 309 aa4.58□□□□□ -1.68
PRP40YKL012W RPP0P05317 312 aaKnown RBP4.57□□□□□ -1.68
PRP40YKL012W KRE6P32486 720 aa4.57□□□□□ -1.68
PRP40YKL012W SRB4P32569 687 aa4.57□□□□□ -1.68
PRP40YKL012W CYM1P32898 989 aa4.57□□□□□ -1.68
PRP40YKL012W ALD5P40047 520 aaKnown RBP4.57□□□□□ -1.68
PRP40YKL012W RPL10P41805 221 aaKnown RBP4.57□□□□□ -1.68
PRP40YKL012W PEX31P53203 462 aa4.57□□□□□ -1.68
PRP40YKL012W TAF9Q05027 157 aa4.57□□□□□ -1.68
PRP40YKL012W CTR3Q06686 241 aa4.57□□□□□ -1.68
PRP40YKL012W SRO7Q12038 1033 aa4.57□□□□□ -1.68
PRP40YKL012W PER33Q12144 273 aa4.57□□□□□ -1.68
PRP40YKL012W TY3B-IQ7LHG5 1498 aaKnown RBP4.56□□□□□ -1.68
PRP40YKL012W RPB4P20433 221 aaPredicted RBP4.56□□□□□ -1.68
PRP40YKL012W MRX3P38172 270 aa4.56□□□□□ -1.68
PRP40YKL012W MSS2P40990 351 aa4.56□□□□□ -1.68
PRP40YKL012W ASG7P46993 209 aa4.56□□□□□ -1.68
PRP40YKL012W MYO5Q04439 1219 aaKnown RBP4.56□□□□□ -1.68
PRP40YKL012W VIK1Q12045 647 aa4.56□□□□□ -1.68
PRP40YKL012W TDH2P00358 332 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W PET494P07390 489 aaPredicted RBP4.55□□□□□ -1.68
PRP40YKL012W DAL81P21657 970 aa4.55□□□□□ -1.68
PRP40YKL012W IES6P32617 166 aa4.55□□□□□ -1.68
PRP40YKL012W YKT6P36015 200 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W GPI18P38211 433 aa4.55□□□□□ -1.68
PRP40YKL012W HIT1P46973 164 aa4.55□□□□□ -1.68
PRP40YKL012W RPL21AQ02753 160 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W SEC13Q04491 297 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W SME1Q12330 94 aaPredicted RBP4.55□□□□□ -1.68
PRP40YKL012W YLR419WQ06698 1435 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W RPS3P05750 240 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W DOA4P32571 926 aa4.55□□□□□ -1.68
PRP40YKL012W GGC1P38988 300 aa4.55□□□□□ -1.68
PRP40YKL012W SHC1P39000 512 aa4.55□□□□□ -1.68
PRP40YKL012W OTU1P43558 301 aa4.55□□□□□ -1.68
PRP40YKL012W RNY1Q02933 434 aaKnown RBP4.55□□□□□ -1.68
PRP40YKL012W YML018CQ03730 393 aa4.55□□□□□ -1.68
PRP40YKL012W NUP188P52593 1655 aaKnown RBP4.54□□□□□ -1.68
PRP40YKL012W COX4P04037 155 aa4.54□□□□□ -1.68
PRP40YKL012W CDC13P32797 924 aaKnown RBP4.54□□□□□ -1.68
PRP40YKL012W TIP20P33891 701 aa4.54□□□□□ -1.68
PRP40YKL012W ATG12P38316 186 aa4.54□□□□□ -1.68
PRP40YKL012W NBP1P52919 319 aaPredicted RBP4.54□□□□□ -1.68
PRP40YKL012W SDT1P53078 280 aa4.54□□□□□ -1.68
PRP40YKL012W KRE28Q04431 385 aa4.54□□□□□ -1.68
PRP40YKL012W YDR018CQ12185 396 aa4.54□□□□□ -1.68
PRP40YKL012W RFT1P38206 574 aaPredicted RBP4.53□□□□□ -1.68
PRP40YKL012W LDB7P38210 180 aa4.53□□□□□ -1.68
PRP40YKL012W YJR012CP47087 207 aa4.53□□□□□ -1.68
PRP40YKL012W MAL13P53338 473 aa4.53□□□□□ -1.68
PRP40YKL012W SEC10Q06245 871 aa4.53□□□□□ -1.68
PRP40YKL012W ASP3-2P0CX77 362 aa4.53□□□□□ -1.69
PRP40YKL012W ASP3-3P0CX78 362 aa4.53□□□□□ -1.69
PRP40YKL012W ASP3-4P0CX79 362 aa4.53□□□□□ -1.69
PRP40YKL012W ASP3-1P0CZ17 362 aa4.53□□□□□ -1.69
PRP40YKL012W YEL045CP32616 141 aa4.53□□□□□ -1.69
PRP40YKL012W MBA1P38300 278 aa4.53□□□□□ -1.69
PRP40YKL012W PGU1P47180 361 aa4.53□□□□□ -1.69
PRP40YKL012W YPS5P53057 165 aa4.53□□□□□ -1.69
PRP40YKL012W YGL039WP53183 348 aaKnown RBP4.53□□□□□ -1.69
PRP40YKL012W API2Q04413 109 aa4.53□□□□□ -1.69
PRP40YKL012W PAL1Q05518 499 aaKnown RBP4.53□□□□□ -1.69
PRP40YKL012W CSM4Q08955 156 aa4.53□□□□□ -1.69
PRP40YKL012W FOL3Q12676 427 aaPredicted RBP4.53□□□□□ -1.69
PRP40YKL012W DNF2Q12675 1612 aa4.52□□□□□ -1.69
PRP40YKL012W YAL064W-BO13512 126 aa4.52□□□□□ -1.69
PRP40YKL012W ARG80P07249 177 aa4.52□□□□□ -1.69
PRP40YKL012W MATALPHA1P0CY06 175 aa4.52□□□□□ -1.69
PRP40YKL012W HMLALPHA1P0CY07 175 aa4.52□□□□□ -1.69
PRP40YKL012W REV1P12689 985 aa4.52□□□□□ -1.69
PRP40YKL012W RPS5P26783 225 aaKnown RBP4.52□□□□□ -1.69
PRP40YKL012W SPS19P32573 292 aaKnown RBP4.52□□□□□ -1.69
PRP40YKL012W FRM2P37261 193 aa4.52□□□□□ -1.69
PRP40YKL012W FMP48P53233 369 aa4.52□□□□□ -1.69
PRP40YKL012W YDR209CQ03480 137 aa4.52□□□□□ -1.69
PRP40YKL012W VHS1Q03785 461 aa4.52□□□□□ -1.69
PRP40YKL012W PEX3P28795 441 aa4.51□□□□□ -1.69
PRP40YKL012W AIM29P36154 155 aa4.51□□□□□ -1.69
PRP40YKL012W GLG2P47011 380 aa4.51□□□□□ -1.69
PRP40YKL012W PGA2P53903 129 aa4.51□□□□□ -1.69
PRP40YKL012W VPS60Q03390 229 aa4.51□□□□□ -1.69
PRP40YKL012W YOS9Q99220 542 aa4.51□□□□□ -1.69
PRP40YKL012W IML1P47170 1584 aa4.51□□□□□ -1.69
PRP40YKL012W RNA15P25299 296 aaPredicted RBP4.5□□□□□ -1.69
PRP40YKL012W SMP1P38128 452 aa4.5□□□□□ -1.69
PRP40YKL012W SMB1P40018 196 aaKnown RBP4.5□□□□□ -1.69
PRP40YKL012W SER33P40510 469 aa4.5□□□□□ -1.69
PRP40YKL012W DSN1P40568 576 aa4.5□□□□□ -1.69
PRP40YKL012W NBP35P52920 328 aa4.5□□□□□ -1.69
PRP40YKL012W NOP13P53883 403 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms