RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W TY4B-HP0C2J7 1802 aa2.11□□□□□ -2.07
CAP1YKL007W TY4B-JP47024 1803 aa2.11□□□□□ -2.07
CAP1YKL007W USO1P25386 1790 aa2.1□□□□□ -2.07
CAP1YKL007W KRE1P17260 313 aa2.1□□□□□ -2.07
CAP1YKL007W SAR1P20606 190 aaKnown RBP2.1□□□□□ -2.07
CAP1YKL007W PRE7P23724 241 aaKnown RBP2.1□□□□□ -2.07
CAP1YKL007W YPS1P32329 569 aa2.1□□□□□ -2.07
CAP1YKL007W CDC13P32797 924 aaKnown RBP2.1□□□□□ -2.07
CAP1YKL007W MRPL40P36534 297 aa2.1□□□□□ -2.07
CAP1YKL007W ATG12P38316 186 aa2.1□□□□□ -2.07
CAP1YKL007W END3P39013 349 aa2.1□□□□□ -2.07
CAP1YKL007W LOH1P47055 219 aa2.1□□□□□ -2.07
CAP1YKL007W SWC4P53201 476 aa2.1□□□□□ -2.07
CAP1YKL007W ERV25P54837 211 aaKnown RBP2.1□□□□□ -2.07
CAP1YKL007W MIX17Q03667 156 aa2.1□□□□□ -2.07
CAP1YKL007W CDD1Q06549 142 aa2.1□□□□□ -2.07
CAP1YKL007W FEX1Q08913 375 aa2.1□□□□□ -2.07
CAP1YKL007W FEX2Q08991 375 aa2.1□□□□□ -2.07
CAP1YKL007W RRP5Q05022 1729 aaKnown RBP2.1□□□□□ -2.07
CAP1YKL007W YRF1-2P40105 1681 aa2.09□□□□□ -2.07
CAP1YKL007W RPC40P07703 335 aaKnown RBP2.09□□□□□ -2.07
CAP1YKL007W MSS116P15424 664 aaKnown RBP2.09□□□□□ -2.07
CAP1YKL007W MRPL3P36516 390 aa2.09□□□□□ -2.07
CAP1YKL007W YGP1P38616 354 aaKnown RBP2.09□□□□□ -2.07
CAP1YKL007W MEP1P40260 492 aa2.09□□□□□ -2.07
CAP1YKL007W PRP24P49960 444 aaKnown RBP2.09□□□□□ -2.07
CAP1YKL007W YGR266WP53326 701 aa2.09□□□□□ -2.07
CAP1YKL007W YPL278CQ08990 100 aa2.09□□□□□ -2.07
CAP1YKL007W TIM22Q12328 207 aa2.09□□□□□ -2.07
CAP1YKL007W KRE5P22023 1365 aa2.09□□□□□ -2.08
CAP1YKL007W RPL16BP26785 198 aaKnown RBP2.08□□□□□ -2.08
CAP1YKL007W GPX1P36014 167 aa2.08□□□□□ -2.08
CAP1YKL007W TPO5P36029 618 aa2.08□□□□□ -2.08
CAP1YKL007W SWC5P38326 303 aa2.08□□□□□ -2.08
CAP1YKL007W VPS45P38932 577 aa2.08□□□□□ -2.08
CAP1YKL007W KRE29P40026 464 aa2.08□□□□□ -2.08
CAP1YKL007W SYS1P41544 203 aa2.08□□□□□ -2.08
CAP1YKL007W VOA1P53262 265 aa2.08□□□□□ -2.08
CAP1YKL007W NNT1Q05874 261 aa2.08□□□□□ -2.08
CAP1YKL007W STE23Q06010 1027 aa2.08□□□□□ -2.08
CAP1YKL007W RRP42Q12277 265 aaPredicted RBP2.08□□□□□ -2.08
CAP1YKL007W YPR1Q12458 312 aa2.08□□□□□ -2.08
CAP1YKL007W OM45P16547 393 aa2.07□□□□□ -2.08
CAP1YKL007W CDC42P19073 191 aa2.07□□□□□ -2.08
CAP1YKL007W DBP3P20447 523 aaKnown RBP2.07□□□□□ -2.08
CAP1YKL007W IMP1P28627 190 aa2.07□□□□□ -2.08
CAP1YKL007W YKL162CP36052 402 aa2.07□□□□□ -2.08
CAP1YKL007W PEX18P38855 283 aa2.07□□□□□ -2.08
CAP1YKL007W RTT105P40063 208 aa2.07□□□□□ -2.08
CAP1YKL007W AIM20P40451 204 aa2.07□□□□□ -2.08
CAP1YKL007W MPP10P47083 593 aaKnown RBP2.07□□□□□ -2.08
CAP1YKL007W UBC13P52490 153 aa2.07□□□□□ -2.08
CAP1YKL007W YNL095CP53932 642 aa2.07□□□□□ -2.08
CAP1YKL007W RGM1Q00453 211 aa2.07□□□□□ -2.08
CAP1YKL007W OSH6Q02201 448 aa2.07□□□□□ -2.08
CAP1YKL007W CAB5Q03941 241 aa2.07□□□□□ -2.08
CAP1YKL007W RRG8Q06109 277 aa2.07□□□□□ -2.08
CAP1YKL007W CUR1Q06469 252 aa2.07□□□□□ -2.08
CAP1YKL007W YLR413WQ06689 675 aa2.07□□□□□ -2.08
CAP1YKL007W APC1P53886 1748 aa2.07□□□□□ -2.08
CAP1YKL007W URB1P34241 1764 aaKnown RBP2.07□□□□□ -2.08
CAP1YKL007W GAL7P08431 366 aa2.06□□□□□ -2.08
CAP1YKL007W SNF6P18888 332 aa2.06□□□□□ -2.08
CAP1YKL007W PHO80P20052 293 aa2.06□□□□□ -2.08
CAP1YKL007W IMP3P32899 183 aaPredicted RBP2.06□□□□□ -2.08
CAP1YKL007W VAB2P40003 282 aa2.06□□□□□ -2.08
CAP1YKL007W AVT6P40074 448 aa2.06□□□□□ -2.08
CAP1YKL007W YIL012WP40551 113 aa2.06□□□□□ -2.08
CAP1YKL007W CDC40P40968 455 aaPredicted RBP2.06□□□□□ -2.08
CAP1YKL007W COX16P47081 118 aa2.06□□□□□ -2.08
CAP1YKL007W MIG2P53035 382 aa2.06□□□□□ -2.08
CAP1YKL007W SYF2P53277 215 aaPredicted RBP2.06□□□□□ -2.08
CAP1YKL007W SPO19Q03029 223 aa2.06□□□□□ -2.08
CAP1YKL007W ABZ2Q03266 374 aa2.06□□□□□ -2.08
CAP1YKL007W YMR111CQ04461 462 aaPredicted RBP2.06□□□□□ -2.08
CAP1YKL007W BCP1Q06338 283 aa2.06□□□□□ -2.08
CAP1YKL007W VAC14Q06708 880 aa2.06□□□□□ -2.08
CAP1YKL007W PBP4Q07362 185 aaKnown RBP2.06□□□□□ -2.08
CAP1YKL007W YDL144CQ07589 356 aa2.06□□□□□ -2.08
CAP1YKL007W PRR2Q12310 699 aa2.06□□□□□ -2.08
CAP1YKL007W YAL063C-AQ3E791 96 aa2.06□□□□□ -2.08
CAP1YKL007W UGA1P17649 471 aa2.05□□□□□ -2.08
CAP1YKL007W OSM1P21375 501 aaKnown RBP2.05□□□□□ -2.08
CAP1YKL007W RRT12P25381 491 aa2.05□□□□□ -2.08
CAP1YKL007W RPC25P35718 212 aa2.05□□□□□ -2.08
CAP1YKL007W MBA1P38300 278 aa2.05□□□□□ -2.08
CAP1YKL007W YER084WP40057 128 aa2.05□□□□□ -2.08
CAP1YKL007W DBP6P53734 629 aaKnown RBP2.05□□□□□ -2.08
CAP1YKL007W TVP15Q03860 143 aa2.05□□□□□ -2.08
CAP1YKL007W ERV41Q04651 352 aa2.05□□□□□ -2.08
CAP1YKL007W PAA1Q12447 191 aaKnown RBP2.05□□□□□ -2.08
CAP1YKL007W ADE6P38972 1358 aaKnown RBP2.05□□□□□ -2.08
CAP1YKL007W CAR2P07991 424 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W ZWF1P11412 505 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W RPL5P26321 297 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W DUR1,2P32528 1835 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W RIB7P33312 244 aa2.04□□□□□ -2.08
CAP1YKL007W TRM7P38238 310 aaKnown RBP2.04□□□□□ -2.08
CAP1YKL007W OPY1P38271 328 aa2.04□□□□□ -2.08
CAP1YKL007W PET100P38958 111 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms