RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C PEX3P28795 441 aa1.2□□□□□ -2.22
VPS55YJR044C PMT2P31382 759 aa1.2□□□□□ -2.22
VPS55YJR044C ALK2P32789 676 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C VPS21P36017 210 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C JEN1P36035 616 aa1.2□□□□□ -2.22
VPS55YJR044C DRE2P36152 348 aa1.2□□□□□ -2.22
VPS55YJR044C RFT1P38206 574 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C EFM1P38732 585 aa1.2□□□□□ -2.22
VPS55YJR044C PET8P38921 284 aa1.2□□□□□ -2.22
VPS55YJR044C NPT1P39683 429 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C FRT2P39734 528 aa1.2□□□□□ -2.22
VPS55YJR044C SEC72P39742 193 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C ERG28P40030 148 aa1.2□□□□□ -2.22
VPS55YJR044C YMR144WP40214 342 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C PRE6P40303 254 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C YIL012WP40551 113 aa1.2□□□□□ -2.22
VPS55YJR044C YIL001WP40560 513 aa1.2□□□□□ -2.22
VPS55YJR044C YJL016WP47072 561 aa1.2□□□□□ -2.22
VPS55YJR044C HSH155P49955 971 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C PRP24P49960 444 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C YPS5P53057 165 aa1.2□□□□□ -2.22
VPS55YJR044C NSA1P53136 463 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C GET1P53192 235 aa1.2□□□□□ -2.22
VPS55YJR044C SLX9P53251 210 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C MAL13P53338 473 aa1.2□□□□□ -2.22
VPS55YJR044C YNR066CP53752 436 aa1.2□□□□□ -2.22
VPS55YJR044C COS1P53822 381 aa1.2□□□□□ -2.22
VPS55YJR044C SUR7P54003 302 aa1.2□□□□□ -2.22
VPS55YJR044C KTR6P54070 446 aa1.2□□□□□ -2.22
VPS55YJR044C PRP38Q00723 242 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C TRM44Q02648 567 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C RPL21AQ02753 160 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C MRX11Q03079 207 aa1.2□□□□□ -2.22
VPS55YJR044C VPS60Q03390 229 aa1.2□□□□□ -2.22
VPS55YJR044C YML018CQ03730 393 aa1.2□□□□□ -2.22
VPS55YJR044C YHC1Q05900 231 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C YLR446WQ06204 433 aa1.2□□□□□ -2.22
VPS55YJR044C PLB3Q08108 686 aa1.2□□□□□ -2.22
VPS55YJR044C RPN8Q08723 338 aaKnown RBP1.2□□□□□ -2.22
VPS55YJR044C CSM4Q08955 156 aa1.2□□□□□ -2.22
VPS55YJR044C YCT1Q12235 531 aa1.2□□□□□ -2.22
VPS55YJR044C SFM1Q12314 213 aa1.2□□□□□ -2.22
VPS55YJR044C SME1Q12330 94 aaPredicted RBP1.2□□□□□ -2.22
VPS55YJR044C JLP1Q12358 412 aa1.2□□□□□ -2.22
VPS55YJR044C SIR4P11978 1358 aa1.2□□□□□ -2.22
VPS55YJR044C YAL064W-BO13512 126 aa1.19□□□□□ -2.22
VPS55YJR044C RPS8AP0CX39 200 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C RPS8BP0CX40 200 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C RPL4AP10664 362 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C EPT1P22140 391 aa1.19□□□□□ -2.22
VPS55YJR044C CDC10P25342 322 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C CHA1P25379 360 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C CDC50P25656 391 aa1.19□□□□□ -2.22
VPS55YJR044C ASF2P32448 525 aaPredicted RBP1.19□□□□□ -2.22
VPS55YJR044C AST1P35183 429 aa1.19□□□□□ -2.22
VPS55YJR044C MRX3P38172 270 aa1.19□□□□□ -2.22
VPS55YJR044C ATG12P38316 186 aa1.19□□□□□ -2.22
VPS55YJR044C SSH1P38353 490 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C PHO89P38361 574 aa1.19□□□□□ -2.22
VPS55YJR044C YHR127WP38833 243 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C TIM17P39515 158 aa1.19□□□□□ -2.22
VPS55YJR044C YHB1P39676 399 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C YER186CP40101 306 aa1.19□□□□□ -2.22
VPS55YJR044C YIL054WP40524 105 aa1.19□□□□□ -2.22
VPS55YJR044C IGD1P43598 195 aa1.19□□□□□ -2.22
VPS55YJR044C ATG18P43601 500 aa1.19□□□□□ -2.22
VPS55YJR044C RPC17P47076 161 aa1.19□□□□□ -2.22
VPS55YJR044C HOC1P47124 396 aa1.19□□□□□ -2.22
VPS55YJR044C YJR079WP47126 109 aa1.19□□□□□ -2.22
VPS55YJR044C ADO1P47143 340 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C RPL4BP49626 362 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C FMP48P53233 369 aa1.19□□□□□ -2.22
VPS55YJR044C YNL040WP53960 456 aaPredicted RBP1.19□□□□□ -2.22
VPS55YJR044C HAL1Q01766 294 aa1.19□□□□□ -2.22
VPS55YJR044C SKI8Q02793 397 aaPredicted RBP1.19□□□□□ -2.22
VPS55YJR044C PRM15Q03262 622 aa1.19□□□□□ -2.22
VPS55YJR044C INP1Q03694 420 aa1.19□□□□□ -2.22
VPS55YJR044C UTP15Q04305 513 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C SEC13Q04491 297 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C CDC123Q05791 360 aa1.19□□□□□ -2.22
VPS55YJR044C CDD1Q06549 142 aa1.19□□□□□ -2.22
VPS55YJR044C YDL144CQ07589 356 aa1.19□□□□□ -2.22
VPS55YJR044C MFG1Q07684 458 aa1.19□□□□□ -2.22
VPS55YJR044C RRP40Q08285 240 aaKnown RBP1.19□□□□□ -2.22
VPS55YJR044C SLD7Q08457 257 aa1.19□□□□□ -2.22
VPS55YJR044C YOR292CQ08743 309 aa1.19□□□□□ -2.22
VPS55YJR044C GPM2Q12008 311 aa1.19□□□□□ -2.22
VPS55YJR044C SLM3Q12093 417 aa1.19□□□□□ -2.22
VPS55YJR044C YOR114WQ12219 294 aa1.19□□□□□ -2.22
VPS55YJR044C YLR126CQ12288 251 aa1.19□□□□□ -2.22
VPS55YJR044C FOL3Q12676 427 aaPredicted RBP1.19□□□□□ -2.22
VPS55YJR044C CMC2Q3E7A4 109 aa1.19□□□□□ -2.22
VPS55YJR044C CCH1P50077 2039 aa1.18□□□□□ -2.22
VPS55YJR044C COX5AP00424 153 aa1.18□□□□□ -2.22
VPS55YJR044C PET494P07390 489 aaPredicted RBP1.18□□□□□ -2.22
VPS55YJR044C FBA1P14540 359 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C PPH21P23594 369 aa1.18□□□□□ -2.22
VPS55YJR044C HOM6P31116 359 aaKnown RBP1.18□□□□□ -2.22
VPS55YJR044C AEP1P32493 518 aa1.18□□□□□ -2.22
VPS55YJR044C SPS19P32573 292 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms