RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W TY1A-ER1P0CX71 440 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-LR2P0CX72 440 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-PLP0CX73 440 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-JR1P0CX74 440 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-LR3P0CX75 440 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-ML2P0CX76 440 aa8.14□□□□□ -1.11
LSB6YJL100W YNL208WP40159 199 aaKnown RBP8.14□□□□□ -1.11
LSB6YJL100W PHO23P50947 330 aa8.14□□□□□ -1.11
LSB6YJL100W YGR026WP53217 278 aa8.14□□□□□ -1.11
LSB6YJL100W RHO3Q00245 231 aaKnown RBP8.14□□□□□ -1.11
LSB6YJL100W HEM25Q07534 307 aa8.14□□□□□ -1.11
LSB6YJL100W YOR385WQ08909 290 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-GR1Q12085 440 aa8.14□□□□□ -1.11
LSB6YJL100W SNU23Q12368 194 aaPredicted RBP8.14□□□□□ -1.11
LSB6YJL100W VMA9Q3E7B6 73 aa8.14□□□□□ -1.11
LSB6YJL100W TY1A-PR3Q6Q5H1 440 aaKnown RBP8.14□□□□□ -1.11
LSB6YJL100W TY1A-OLQ92392 440 aaKnown RBP8.14□□□□□ -1.11
LSB6YJL100W GAS1P22146 559 aaKnown RBP8.13□□□□□ -1.11
LSB6YJL100W PMT2P31382 759 aa8.13□□□□□ -1.11
LSB6YJL100W DBF20P32328 564 aa8.13□□□□□ -1.11
LSB6YJL100W COS8P38723 381 aa8.13□□□□□ -1.11
LSB6YJL100W GCV3P39726 170 aaPredicted RBP8.13□□□□□ -1.11
LSB6YJL100W YIP4P53093 235 aa8.13□□□□□ -1.11
LSB6YJL100W PEX25Q02969 394 aa8.13□□□□□ -1.11
LSB6YJL100W RDR1Q08904 546 aa8.13□□□□□ -1.11
LSB6YJL100W YRM1Q12340 786 aa8.13□□□□□ -1.11
LSB6YJL100W PCC1Q3E833 88 aa8.13□□□□□ -1.11
LSB6YJL100W RPL20AP0CX23 172 aaKnown RBP8.13□□□□□ -1.11
LSB6YJL100W RPL20BP0CX24 172 aaPredicted RBP8.13□□□□□ -1.11
LSB6YJL100W LRO1P40345 661 aa8.13□□□□□ -1.11
LSB6YJL100W LTP1P40347 161 aa8.13□□□□□ -1.11
LSB6YJL100W PHB2P50085 310 aa8.13□□□□□ -1.11
LSB6YJL100W SGA1P08019 549 aa8.12□□□□□ -1.11
LSB6YJL100W ISC10P32645 267 aa8.12□□□□□ -1.11
LSB6YJL100W PAN3P36102 679 aaPredicted RBP8.12□□□□□ -1.11
LSB6YJL100W BET3P36149 193 aa8.12□□□□□ -1.11
LSB6YJL100W OGG1P53397 376 aaPredicted RBP8.12□□□□□ -1.11
LSB6YJL100W BNA5Q05979 453 aa8.12□□□□□ -1.11
LSB6YJL100W YPR091CQ06833 770 aa8.12□□□□□ -1.11
LSB6YJL100W ORT1Q12375 292 aa8.12□□□□□ -1.11
LSB6YJL100W TFC7Q12415 435 aa8.12□□□□□ -1.11
LSB6YJL100W ISN1Q99312 450 aa8.12□□□□□ -1.11
LSB6YJL100W Q0142Q9ZZW4 58 aa8.12□□□□□ -1.11
LSB6YJL100W SNF5P18480 905 aa8.11□□□□□ -1.11
LSB6YJL100W CWH43P25618 953 aa8.11□□□□□ -1.11
LSB6YJL100W VPS51P36116 164 aa8.11□□□□□ -1.11
LSB6YJL100W CIN2P46670 268 aa8.11□□□□□ -1.11
LSB6YJL100W YGL117WP53133 265 aa8.11□□□□□ -1.11
LSB6YJL100W YGR250CP53316 781 aaKnown RBP8.11□□□□□ -1.11
LSB6YJL100W SPR28Q04921 423 aa8.11□□□□□ -1.11
LSB6YJL100W HDA2Q06629 674 aa8.11□□□□□ -1.11
LSB6YJL100W YEH1Q07804 573 aa8.11□□□□□ -1.11
LSB6YJL100W YDR262WQ12331 272 aa8.11□□□□□ -1.11
LSB6YJL100W AI1P03875 834 aa8.1□□□□□ -1.11
LSB6YJL100W RPS13P05756 151 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W MCM1P11746 286 aa8.1□□□□□ -1.11
LSB6YJL100W YKL071WP36086 256 aa8.1□□□□□ -1.11
LSB6YJL100W VBA2P38358 474 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W PUG1P40100 303 aa8.1□□□□□ -1.11
LSB6YJL100W GPI14P47088 403 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W CTF19Q02732 369 aa8.1□□□□□ -1.11
LSB6YJL100W SMA2Q04658 369 aa8.1□□□□□ -1.11
LSB6YJL100W LEU9Q12166 604 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W PRM4Q12498 284 aa8.1□□□□□ -1.11
LSB6YJL100W TFB5Q3E7C1 72 aaPredicted RBP8.1□□□□□ -1.11
LSB6YJL100W PTP1P25044 335 aa8.1□□□□□ -1.11
LSB6YJL100W NAB2P32505 525 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
LSB6YJL100W SMB1P40018 196 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W YIL024CP40543 189 aa8.1□□□□□ -1.11
LSB6YJL100W NIT3P49954 291 aa8.1□□□□□ -1.11
LSB6YJL100W UBP8P50102 471 aa8.1□□□□□ -1.11
LSB6YJL100W PDR16P53860 351 aaKnown RBP8.1□□□□□ -1.11
LSB6YJL100W YOL073CQ08232 322 aa8.1□□□□□ -1.11
LSB6YJL100W GLO4Q12320 285 aa8.1□□□□□ -1.11
LSB6YJL100W RRI1Q12468 440 aa8.1□□□□□ -1.11
LSB6YJL100W TPI1P00942 248 aaKnown RBP8.09□□□□□ -1.11
LSB6YJL100W RPB8P20436 146 aa8.09□□□□□ -1.11
LSB6YJL100W PAD1P33751 242 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
LSB6YJL100W MRPL27P36526 146 aaPredicted RBP8.09□□□□□ -1.11
LSB6YJL100W BFR1P38934 470 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
LSB6YJL100W ASP1P38986 381 aaPredicted RBP8.09□□□□□ -1.11
LSB6YJL100W PAC1P39946 494 aaKnown RBP8.09□□□□□ -1.11
LSB6YJL100W SYS1P41544 203 aa8.09□□□□□ -1.11
LSB6YJL100W RNH70P53331 553 aa8.09□□□□□ -1.11
LSB6YJL100W NRK1P53915 240 aa8.09□□□□□ -1.11
LSB6YJL100W SNO1Q03144 224 aa8.09□□□□□ -1.11
LSB6YJL100W HBN1Q96VH4 193 aa8.09□□□□□ -1.11
LSB6YJL100W HNM1P19807 563 aa8.08□□□□□ -1.12
LSB6YJL100W LDS1P31379 325 aa8.08□□□□□ -1.12
LSB6YJL100W SPT10P35208 640 aa8.08□□□□□ -1.12
LSB6YJL100W CCC1P47818 322 aa8.08□□□□□ -1.12
LSB6YJL100W CAC2Q04199 468 aa8.08□□□□□ -1.12
LSB6YJL100W VBA4Q04602 768 aaKnown RBP8.08□□□□□ -1.12
LSB6YJL100W NOC4Q06512 552 aaPredicted RBP8.08□□□□□ -1.12
LSB6YJL100W TDH1P00360 332 aaKnown RBP8.08□□□□□ -1.12
LSB6YJL100W CHO1P08456 276 aa8.08□□□□□ -1.12
LSB6YJL100W RPL1AP0CX43 217 aaKnown RBP8.08□□□□□ -1.12
LSB6YJL100W RPL1BP0CX44 217 aaKnown RBP8.08□□□□□ -1.12
LSB6YJL100W STE18P18852 110 aa8.08□□□□□ -1.12
LSB6YJL100W PET18P25362 215 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms