RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C CLB6P32943 380 aa3.09□□□□□ -1.92
VPS53YJL029C AST1P35183 429 aa3.09□□□□□ -1.92
VPS53YJL029C SSZ1P38788 538 aaKnown RBP3.09□□□□□ -1.92
VPS53YJL029C PUG1P40100 303 aa3.09□□□□□ -1.92
VPS53YJL029C PIG2P40187 538 aa3.09□□□□□ -1.92
VPS53YJL029C PFS2P42841 465 aaKnown RBP3.09□□□□□ -1.92
VPS53YJL029C IRC7P43623 340 aa3.09□□□□□ -1.92
VPS53YJL029C RMD9P53140 646 aaKnown RBP3.09□□□□□ -1.92
VPS53YJL029C MTM1P53320 366 aa3.09□□□□□ -1.92
VPS53YJL029C TNA1P53322 534 aa3.09□□□□□ -1.92
VPS53YJL029C TIM10P87108 93 aa3.09□□□□□ -1.92
VPS53YJL029C RSM23Q01163 450 aa3.09□□□□□ -1.92
VPS53YJL029C OST6Q03723 332 aa3.09□□□□□ -1.92
VPS53YJL029C ARP10Q04549 284 aa3.09□□□□□ -1.92
VPS53YJL029C HMS1Q12398 434 aa3.09□□□□□ -1.92
VPS53YJL029C YPL119C-AQ3E751 87 aa3.09□□□□□ -1.92
VPS53YJL029C REP1P03871 373 aa3.08□□□□□ -1.92
VPS53YJL029C YGL041W-AP0C5N3 154 aa3.08□□□□□ -1.92
VPS53YJL029C RPS16AP0CX51 143 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C RPS16BP0CX52 143 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C RPS5P26783 225 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C PPA2P28239 310 aa3.08□□□□□ -1.92
VPS53YJL029C SPT10P35208 640 aa3.08□□□□□ -1.92
VPS53YJL029C APL3P38065 1025 aa3.08□□□□□ -1.92
VPS53YJL029C ECM8P38246 354 aa3.08□□□□□ -1.92
VPS53YJL029C SBE22P38814 852 aa3.08□□□□□ -1.92
VPS53YJL029C GAT2P40209 560 aa3.08□□□□□ -1.92
VPS53YJL029C RET2P43621 546 aa3.08□□□□□ -1.92
VPS53YJL029C CCC1P47818 322 aa3.08□□□□□ -1.92
VPS53YJL029C SLI1P53304 468 aa3.08□□□□□ -1.92
VPS53YJL029C HHT1P61830 136 aa3.08□□□□□ -1.92
VPS53YJL029C HOT1Q03213 719 aa3.08□□□□□ -1.92
VPS53YJL029C SMP3Q04174 516 aa3.08□□□□□ -1.92
VPS53YJL029C NNT1Q05874 261 aa3.08□□□□□ -1.92
VPS53YJL029C CTS2Q06350 511 aa3.08□□□□□ -1.92
VPS53YJL029C IPK1Q06667 281 aa3.08□□□□□ -1.92
VPS53YJL029C ERP4Q12450 207 aa3.08□□□□□ -1.92
VPS53YJL029C FSH3Q99369 266 aa3.08□□□□□ -1.92
VPS53YJL029C OPI3P05375 206 aa3.08□□□□□ -1.92
VPS53YJL029C YML003WP0CF16 290 aa3.08□□□□□ -1.92
VPS53YJL029C CDC39P25655 2108 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C FUN19P28003 413 aaPredicted RBP3.08□□□□□ -1.92
VPS53YJL029C UBC8P28263 218 aa3.08□□□□□ -1.92
VPS53YJL029C MNS1P32906 549 aa3.08□□□□□ -1.92
VPS53YJL029C YKL187CP34231 750 aa3.08□□□□□ -1.92
VPS53YJL029C YPK3P38070 525 aa3.08□□□□□ -1.92
VPS53YJL029C BUR6P40096 142 aa3.08□□□□□ -1.92
VPS53YJL029C QRI1P43123 477 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C YGR016WP53209 190 aa3.08□□□□□ -1.92
VPS53YJL029C RRN9P53437 365 aa3.08□□□□□ -1.92
VPS53YJL029C GMC1Q04399 608 aa3.08□□□□□ -1.92
VPS53YJL029C RRS1Q08746 203 aaKnown RBP3.08□□□□□ -1.92
VPS53YJL029C FRE3Q08905 711 aa3.08□□□□□ -1.92
VPS53YJL029C BLM10P43583 2143 aa3.07□□□□□ -1.92
VPS53YJL029C HNM1P19807 563 aa3.07□□□□□ -1.92
VPS53YJL029C DAL80P26343 269 aa3.07□□□□□ -1.92
VPS53YJL029C VPH2P32341 215 aa3.07□□□□□ -1.92
VPS53YJL029C PRP21P32524 280 aaPredicted RBP3.07□□□□□ -1.92
VPS53YJL029C FAT1P38225 669 aa3.07□□□□□ -1.92
VPS53YJL029C SOP4P39543 234 aaPredicted RBP3.07□□□□□ -1.92
VPS53YJL029C SFH5P47008 294 aa3.07□□□□□ -1.92
VPS53YJL029C LOH1P47055 219 aa3.07□□□□□ -1.92
VPS53YJL029C BRR6P53062 197 aa3.07□□□□□ -1.92
VPS53YJL029C INN1P53901 409 aa3.07□□□□□ -1.92
VPS53YJL029C CRZ1P53968 678 aa3.07□□□□□ -1.92
VPS53YJL029C SAM50P53969 484 aa3.07□□□□□ -1.92
VPS53YJL029C YMD8Q03697 442 aa3.07□□□□□ -1.92
VPS53YJL029C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
VPS53YJL029C SYC1Q08553 188 aaPredicted RBP3.07□□□□□ -1.92
VPS53YJL029C FIT3Q08907 204 aa3.07□□□□□ -1.92
VPS53YJL029C GEP5Q12393 293 aa3.07□□□□□ -1.92
VPS53YJL029C SPS4P09937 338 aa3.07□□□□□ -1.92
VPS53YJL029C IDP1P21954 428 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C YCL002CP25565 263 aa3.07□□□□□ -1.92
VPS53YJL029C SSE2P32590 693 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C THI2P38141 450 aa3.07□□□□□ -1.92
VPS53YJL029C PHO90P39535 881 aa3.07□□□□□ -1.92
VPS53YJL029C YJL055WP47044 245 aa3.07□□□□□ -1.92
VPS53YJL029C YIP4P53093 235 aa3.07□□□□□ -1.92
VPS53YJL029C TEX1P53851 422 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C ASI2P53895 289 aa3.07□□□□□ -1.92
VPS53YJL029C PGA1P53896 198 aa3.07□□□□□ -1.92
VPS53YJL029C SKO1Q02100 647 aa3.07□□□□□ -1.92
VPS53YJL029C NUP49Q02199 472 aa3.07□□□□□ -1.92
VPS53YJL029C YDC1Q02896 317 aa3.07□□□□□ -1.92
VPS53YJL029C MRP51Q02950 344 aa3.07□□□□□ -1.92
VPS53YJL029C YDR102CQ03864 110 aa3.07□□□□□ -1.92
VPS53YJL029C SWA2Q06677 668 aa3.07□□□□□ -1.92
VPS53YJL029C DTD1Q07648 150 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C LOT6Q07923 191 aa3.07□□□□□ -1.92
VPS53YJL029C THP3Q12049 470 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C USB1Q12208 290 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C MCT1Q12283 360 aa3.07□□□□□ -1.92
VPS53YJL029C YLR126CQ12288 251 aa3.07□□□□□ -1.92
VPS53YJL029C PST2Q12335 198 aaKnown RBP3.07□□□□□ -1.92
VPS53YJL029C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
VPS53YJL029C YBR182C-AQ8TGU6 64 aa3.07□□□□□ -1.92
VPS53YJL029C YER145C-AA0A023PYF4 145 aa3.06□□□□□ -1.92
VPS53YJL029C QCR7P00128 127 aa3.06□□□□□ -1.92
VPS53YJL029C COX9P07255 59 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 50 ms