RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C SHG1P38337 142 aa5.22□□□□□ -1.57
SFB3YHR098C GAT2P40209 560 aa5.22□□□□□ -1.57
SFB3YHR098C CIN5P40917 295 aa5.22□□□□□ -1.57
SFB3YHR098C RPA34P47006 233 aaPredicted RBP5.22□□□□□ -1.57
SFB3YHR098C YPL062WQ02781 134 aa5.22□□□□□ -1.57
SFB3YHR098C CWC21Q03375 135 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C SPG3Q04398 127 aaPredicted RBP5.22□□□□□ -1.57
SFB3YHR098C YPR127WQ06494 345 aa5.22□□□□□ -1.57
SFB3YHR098C IPK1Q06667 281 aa5.22□□□□□ -1.57
SFB3YHR098C DDC1Q08949 612 aa5.22□□□□□ -1.57
SFB3YHR098C TRM13Q12383 476 aa5.22□□□□□ -1.57
SFB3YHR098C YNR034W-AQ3E841 98 aa5.22□□□□□ -1.57
SFB3YHR098C YBR182C-AQ8TGU6 64 aa5.22□□□□□ -1.57
SFB3YHR098C MEX67Q99257 599 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C UBI4P0CG63 381 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C RPL40AP0CH08 128 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C RPL40BP0CH09 128 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C SNF5P18480 905 aa5.22□□□□□ -1.57
SFB3YHR098C EPT1P22140 391 aa5.22□□□□□ -1.57
SFB3YHR098C TCD2P36101 447 aaKnown RBP5.22□□□□□ -1.57
SFB3YHR098C GEX2P36173 615 aa5.22□□□□□ -1.57
SFB3YHR098C YBR053CP38235 358 aa5.22□□□□□ -1.57
SFB3YHR098C SMK1P41808 388 aa5.22□□□□□ -1.57
SFB3YHR098C YJR149WP47177 404 aa5.22□□□□□ -1.57
SFB3YHR098C NUP57P48837 541 aa5.22□□□□□ -1.57
SFB3YHR098C YSA1Q01976 231 aa5.22□□□□□ -1.57
SFB3YHR098C EST3Q03096 181 aa5.22□□□□□ -1.57
SFB3YHR098C RNH202Q05635 350 aa5.22□□□□□ -1.57
SFB3YHR098C SOD2P00447 233 aa5.21□□□□□ -1.57
SFB3YHR098C HAP2P06774 265 aa5.21□□□□□ -1.57
SFB3YHR098C PPH21P23594 369 aa5.21□□□□□ -1.57
SFB3YHR098C RNA15P25299 296 aaPredicted RBP5.21□□□□□ -1.57
SFB3YHR098C ATS1P31386 333 aa5.21□□□□□ -1.57
SFB3YHR098C MF(ALPHA)2P32435 120 aa5.21□□□□□ -1.57
SFB3YHR098C GCS1P35197 352 aa5.21□□□□□ -1.57
SFB3YHR098C REG2P38232 338 aa5.21□□□□□ -1.57
SFB3YHR098C PHO90P39535 881 aa5.21□□□□□ -1.57
SFB3YHR098C SLZ1P40167 298 aa5.21□□□□□ -1.57
SFB3YHR098C GLC8P41818 229 aa5.21□□□□□ -1.57
SFB3YHR098C YFL054CP43549 646 aa5.21□□□□□ -1.57
SFB3YHR098C ALK1P43633 760 aaKnown RBP5.21□□□□□ -1.57
SFB3YHR098C MTQ1P53944 314 aa5.21□□□□□ -1.57
SFB3YHR098C RIM13Q03792 727 aa5.21□□□□□ -1.57
SFB3YHR098C NOC4Q06512 552 aaPredicted RBP5.21□□□□□ -1.57
SFB3YHR098C NDJ1Q12366 352 aa5.21□□□□□ -1.57
SFB3YHR098C RIP1P08067 215 aa5.21□□□□□ -1.58
SFB3YHR098C SCL1P21243 252 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C PUB1P32588 453 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SFB3YHR098C LOT5P34234 306 aa5.21□□□□□ -1.58
SFB3YHR098C RMA1P36001 430 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C AIM29P36154 155 aa5.21□□□□□ -1.58
SFB3YHR098C CFD1P40558 293 aa5.21□□□□□ -1.58
SFB3YHR098C UFD1P53044 361 aa5.21□□□□□ -1.58
SFB3YHR098C MRP51Q02950 344 aa5.21□□□□□ -1.58
SFB3YHR098C MSC2Q03455 724 aa5.21□□□□□ -1.58
SFB3YHR098C FIT1Q04433 528 aa5.21□□□□□ -1.58
SFB3YHR098C CRF1Q04930 467 aa5.21□□□□□ -1.58
SFB3YHR098C DCI1Q08558 271 aa5.21□□□□□ -1.58
SFB3YHR098C YPL272CQ08984 517 aa5.21□□□□□ -1.58
SFB3YHR098C MRP10O75012 95 aa5.21□□□□□ -1.58
SFB3YHR098C RPL11AP0C0W9 174 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C RPL31AP0C2H8 113 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C RPL31BP0C2H9 113 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C PET18P25362 215 aa5.21□□□□□ -1.58
SFB3YHR098C EHD3P28817 500 aa5.21□□□□□ -1.58
SFB3YHR098C HMF1P40037 129 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C OSW5P40219 148 aa5.21□□□□□ -1.58
SFB3YHR098C YJR124CP47159 448 aa5.21□□□□□ -1.58
SFB3YHR098C BER1Q06688 274 aaKnown RBP5.21□□□□□ -1.58
SFB3YHR098C SRO7Q12038 1033 aa5.21□□□□□ -1.58
SFB3YHR098C BTS1Q12051 335 aa5.21□□□□□ -1.58
SFB3YHR098C FYV7Q12247 151 aa5.21□□□□□ -1.58
SFB3YHR098C RPL11BQ3E757 174 aaPredicted RBP5.21□□□□□ -1.58
SFB3YHR098C KIN28P06242 306 aa5.2□□□□□ -1.58
SFB3YHR098C YGL015CP33199 130 aa5.2□□□□□ -1.58
SFB3YHR098C MAC1P35192 417 aa5.2□□□□□ -1.58
SFB3YHR098C MRPL11P36521 249 aaPredicted RBP5.2□□□□□ -1.58
SFB3YHR098C YCR087C-AP37263 153 aa5.2□□□□□ -1.58
SFB3YHR098C THI2P38141 450 aa5.2□□□□□ -1.58
SFB3YHR098C SRO77P38163 1010 aa5.2□□□□□ -1.58
SFB3YHR098C YER158CP40095 573 aa5.2□□□□□ -1.58
SFB3YHR098C YJR012CP47087 207 aa5.2□□□□□ -1.58
SFB3YHR098C ABM1P47146 123 aa5.2□□□□□ -1.58
SFB3YHR098C EXG2P52911 562 aa5.2□□□□□ -1.58
SFB3YHR098C COQ6P53318 479 aa5.2□□□□□ -1.58
SFB3YHR098C PAU12P53343 120 aa5.2□□□□□ -1.58
SFB3YHR098C EFM6P53970 246 aa5.2□□□□□ -1.58
SFB3YHR098C NMA1Q06178 401 aaKnown RBP5.2□□□□□ -1.58
SFB3YHR098C FRQ1Q06389 190 aa5.2□□□□□ -1.58
SFB3YHR098C BSP1Q06604 576 aa5.2□□□□□ -1.58
SFB3YHR098C FDH1Q08911 376 aa5.2□□□□□ -1.58
SFB3YHR098C FSH3Q99369 266 aa5.2□□□□□ -1.58
SFB3YHR098C ADH2P00331 348 aaKnown RBP5.2□□□□□ -1.58
SFB3YHR098C COX3P00420 269 aa5.2□□□□□ -1.58
SFB3YHR098C ADK1P07170 222 aaKnown RBP5.2□□□□□ -1.58
SFB3YHR098C SGA1P08019 549 aa5.2□□□□□ -1.58
SFB3YHR098C RFA1P22336 621 aaKnown RBP5.2□□□□□ -1.58
SFB3YHR098C OMA1P36163 345 aa5.2□□□□□ -1.58
SFB3YHR098C MRPL4P36517 319 aa5.2□□□□□ -1.58
SFB3YHR098C YBR096WP38256 230 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 77 ms