RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	MTW1	P39731	289 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	YGL039W	P53183	348 aa	Known RBP	3.68	□□□□□ -1.82
VMA22	YHR060W	YNL040W	P53960	456 aa	Predicted RBP	3.68	□□□□□ -1.82
VMA22	YHR060W	CRZ1	P53968	678 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	RHO3	Q00245	231 aa	Known RBP	3.68	□□□□□ -1.82
VMA22	YHR060W	CDC14	Q00684	551 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	MRS2	Q01926	470 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	CTF19	Q02732	369 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	VPS60	Q03390	229 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	YET3	Q07451	203 aa		3.68	□□□□□ -1.82
VMA22	YHR060W	FBA1	P14540	359 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	SNF6	P18888	332 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	APA2	P22108	325 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	ADE1	P27616	306 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	CAM1	P29547	415 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	PMT2	P31382	759 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	PRX1	P34227	261 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	TAF14	P35189	244 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	WSC4	P38739	605 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	PTH1	P38876	190 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	CHL4	P38907	458 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	PET8	P38921	284 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	VAB2	P40003	282 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	YJR085C	P47131	105 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	BIR1	P47134	954 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	ADO1	P47143	340 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	MGA1	P53050	456 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	NOP19	P53317	196 aa	Predicted RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	TPS1	Q00764	495 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	SKI8	Q02793	397 aa	Predicted RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	PEX10	Q05568	337 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	YHC1	Q05900	231 aa	Known RBP	3.67	□□□□□ -1.82
VMA22	YHR060W	IRC25	Q07951	179 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	PPT2	Q12036	173 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	MCT1	Q12283	360 aa		3.67	□□□□□ -1.82
VMA22	YHR060W	YDR157W	A0A023PZE8	133 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	QCR7	P00128	127 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	SPT3	P06844	337 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	BCY1	P07278	416 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	RPL4A	P10664	362 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	RFA3	P26755	122 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	SPS19	P32573	292 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	CDC13	P32797	924 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	GDH2	P33327	1092 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	RFT1	P38206	574 aa	Predicted RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	MED8	P38304	223 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	YHR127W	P38833	243 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	YER186C	P40101	306 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	PAN6	P40459	309 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	NUP57	P48837	541 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	RPL4B	P49626	362 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	YNR066C	P53752	436 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	FYV6	P53913	173 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	SWS2	P53937	143 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	YMR114C	Q04471	368 aa	Known RBP	3.66	□□□□□ -1.82
VMA22	YHR060W	CDD1	Q06549	142 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	RFM1	Q12192	310 aa		3.66	□□□□□ -1.82
VMA22	YHR060W	RPS14A	P06367	137 aa	Known RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	ARO2	P28777	376 aa	Known RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	SOL2	P37262	315 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	RPS14B	P39516	138 aa	Known RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	PTI1	P39927	425 aa	Predicted RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	KRE29	P40026	464 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	YIL067C	P40514	678 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	EGT2	P42835	1041 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	IRC18	P47056	224 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	SDS23	P53172	527 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	CRH1	P53301	507 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	SSU72	P53538	206 aa	Predicted RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	RNH201	P53942	307 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	PRP38	Q00723	242 aa	Predicted RBP	3.65	□□□□□ -1.83
VMA22	YHR060W	ADD37	Q03233	198 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	PRM15	Q03262	622 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	PBA1	Q05778	276 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	TIP41	Q12199	356 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	IZH2	Q12442	317 aa		3.65	□□□□□ -1.83
VMA22	YHR060W	YAK1	P14680	807 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	DPB2	P24482	689 aa	Predicted RBP	3.64	□□□□□ -1.83
VMA22	YHR060W	YBL059W	P34224	193 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	YKL075C	P36083	450 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	MRPL39	P36533	70 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	ATG12	P38316	186 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	ATG18	P43601	500 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	MCM22	P47167	239 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	PRP24	P49960	444 aa	Known RBP	3.64	□□□□□ -1.83
VMA22	YHR060W	NBP35	P52920	328 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	SLX9	P53251	210 aa	Predicted RBP	3.64	□□□□□ -1.83
VMA22	YHR060W	TPC1	P53257	314 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	DXO1	Q06349	442 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	YCL021W-A	Q96VH3	125 aa		3.64	□□□□□ -1.83
VMA22	YHR060W	BGL2	P15703	313 aa	Known RBP	3.63	□□□□□ -1.83
VMA22	YHR060W	CSE2	P33308	149 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	NTF2	P33331	125 aa	Known RBP	3.63	□□□□□ -1.83
VMA22	YHR060W	CAF4	P36130	643 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	MRPL3	P36516	390 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	SHG1	P38337	142 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	YMR144W	P40214	342 aa	Known RBP	3.63	□□□□□ -1.83
VMA22	YHR060W	SER33	P40510	469 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	YJL016W	P47072	561 aa		3.63	□□□□□ -1.83
VMA22	YHR060W	YJR054W	P47114	497 aa		3.63	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms