RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C CBF1P17106 351 aa3.37□□□□□ -1.87
SPB4YFL002C CDC13P32797 924 aaKnown RBP3.37□□□□□ -1.87
SPB4YFL002C MRP21P38175 177 aa3.37□□□□□ -1.87
SPB4YFL002C MBA1P38300 278 aa3.37□□□□□ -1.87
SPB4YFL002C OXA1P39952 402 aa3.37□□□□□ -1.87
SPB4YFL002C CDC123Q05791 360 aa3.37□□□□□ -1.87
SPB4YFL002C LOA1Q06508 300 aa3.37□□□□□ -1.87
SPB4YFL002C VIK1Q12045 647 aa3.37□□□□□ -1.87
SPB4YFL002C PHO2P07269 559 aa3.36□□□□□ -1.87
SPB4YFL002C EHD3P28817 500 aa3.36□□□□□ -1.87
SPB4YFL002C TAF14P35189 244 aa3.36□□□□□ -1.87
SPB4YFL002C MRPL10P36520 322 aa3.36□□□□□ -1.87
SPB4YFL002C RFS1P38234 210 aaKnown RBP3.36□□□□□ -1.87
SPB4YFL002C YBR096WP38256 230 aa3.36□□□□□ -1.87
SPB4YFL002C SLX1P38324 304 aa3.36□□□□□ -1.87
SPB4YFL002C PRE6P40303 254 aaKnown RBP3.36□□□□□ -1.87
SPB4YFL002C LIF1P53150 421 aa3.36□□□□□ -1.87
SPB4YFL002C HOP2P53187 214 aa3.36□□□□□ -1.87
SPB4YFL002C CTF19Q02732 369 aa3.36□□□□□ -1.87
SPB4YFL002C YMR166CQ03829 368 aa3.36□□□□□ -1.87
SPB4YFL002C YET2Q04210 160 aa3.36□□□□□ -1.87
SPB4YFL002C PLB3Q08108 686 aa3.36□□□□□ -1.87
SPB4YFL002C ABP140Q08641 628 aaKnown RBP3.36□□□□□ -1.87
SPB4YFL002C KSS1P14681 368 aa3.35□□□□□ -1.87
SPB4YFL002C AAT2P23542 418 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C RME1P32338 300 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C BAT1P38891 393 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C COG7P53195 279 aa3.35□□□□□ -1.87
SPB4YFL002C YDR222WQ04925 415 aa3.35□□□□□ -1.87
SPB4YFL002C YPR098CQ06089 161 aa3.35□□□□□ -1.87
SPB4YFL002C RRS1Q08746 203 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C RPL21BQ12672 160 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C RAD9P14737 1309 aa3.35□□□□□ -1.87
SPB4YFL002C YDR157WA0A023PZE8 133 aa3.35□□□□□ -1.87
SPB4YFL002C RPL4AP10664 362 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C BGL2P15703 313 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C SSO1P32867 290 aa3.35□□□□□ -1.87
SPB4YFL002C YKL075CP36083 450 aa3.35□□□□□ -1.87
SPB4YFL002C ECM4P36156 370 aa3.35□□□□□ -1.87
SPB4YFL002C SOL2P37262 315 aa3.35□□□□□ -1.87
SPB4YFL002C FZO1P38297 855 aa3.35□□□□□ -1.87
SPB4YFL002C EFM1P38732 585 aa3.35□□□□□ -1.87
SPB4YFL002C TIM17P39515 158 aa3.35□□□□□ -1.87
SPB4YFL002C STB1P42845 420 aa3.35□□□□□ -1.87
SPB4YFL002C RPL4BP49626 362 aaKnown RBP3.35□□□□□ -1.87
SPB4YFL002C MIC26P50087 233 aa3.35□□□□□ -1.87
SPB4YFL002C RNH201P53942 307 aa3.35□□□□□ -1.87
SPB4YFL002C YOR376WQ08900 122 aa3.35□□□□□ -1.87
SPB4YFL002C HTB1P02293 131 aaKnown RBP3.34□□□□□ -1.87
SPB4YFL002C HTB2P02294 131 aa3.34□□□□□ -1.87
SPB4YFL002C CDC10P25342 322 aaKnown RBP3.34□□□□□ -1.87
SPB4YFL002C ATG15P25641 520 aa3.34□□□□□ -1.87
SPB4YFL002C CDC50P25656 391 aa3.34□□□□□ -1.87
SPB4YFL002C FRM2P37261 193 aa3.34□□□□□ -1.87
SPB4YFL002C MED8P38304 223 aa3.34□□□□□ -1.87
SPB4YFL002C WSC4P38739 605 aa3.34□□□□□ -1.87
SPB4YFL002C KRE9P39005 276 aa3.34□□□□□ -1.87
SPB4YFL002C SDC1Q03323 175 aa3.34□□□□□ -1.87
SPB4YFL002C YMR114CQ04471 368 aaKnown RBP3.34□□□□□ -1.87
SPB4YFL002C ARC18Q05933 178 aaKnown RBP3.34□□□□□ -1.87
SPB4YFL002C COQ10Q08058 207 aa3.34□□□□□ -1.87
SPB4YFL002C NDD1Q08887 554 aa3.34□□□□□ -1.87
SPB4YFL002C SRO7Q12038 1033 aa3.34□□□□□ -1.87
SPB4YFL002C RFM1Q12192 310 aa3.34□□□□□ -1.87
SPB4YFL002C ADE1P27616 306 aa3.33□□□□□ -1.88
SPB4YFL002C IDH1P28834 360 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SPB4YFL002C NTF2P33331 125 aaKnown RBP3.33□□□□□ -1.88
SPB4YFL002C SHE3P38272 425 aaKnown RBP3.33□□□□□ -1.88
SPB4YFL002C OM14P38325 134 aa3.33□□□□□ -1.88
SPB4YFL002C MIG3P39943 394 aa3.33□□□□□ -1.88
SPB4YFL002C YML122CQ03207 126 aa3.33□□□□□ -1.88
SPB4YFL002C ATG17Q06410 417 aa3.33□□□□□ -1.88
SPB4YFL002C YCL012CQ8J0M4 134 aa3.33□□□□□ -1.88
SPB4YFL002C ASP3-2P0CX77 362 aa3.33□□□□□ -1.88
SPB4YFL002C ASP3-3P0CX78 362 aa3.33□□□□□ -1.88
SPB4YFL002C ASP3-4P0CX79 362 aa3.33□□□□□ -1.88
SPB4YFL002C ASP3-1P0CZ17 362 aa3.33□□□□□ -1.88
SPB4YFL002C ATP7P30902 174 aa3.33□□□□□ -1.88
SPB4YFL002C PRX1P34227 261 aaKnown RBP3.33□□□□□ -1.88
SPB4YFL002C GOS1P38736 223 aa3.33□□□□□ -1.88
SPB4YFL002C MGA1P53050 456 aa3.33□□□□□ -1.88
SPB4YFL002C RMR1P53060 241 aa3.33□□□□□ -1.88
SPB4YFL002C GET1P53192 235 aa3.33□□□□□ -1.88
SPB4YFL002C NOP19P53317 196 aaPredicted RBP3.33□□□□□ -1.88
SPB4YFL002C BOR1P53838 576 aa3.33□□□□□ -1.88
SPB4YFL002C RMI1Q02685 241 aa3.33□□□□□ -1.88
SPB4YFL002C MMT2Q08970 484 aa3.33□□□□□ -1.88
SPB4YFL002C DCN1Q12395 269 aa3.33□□□□□ -1.88
SPB4YFL002C YMR316C-AI2HB70 103 aa3.32□□□□□ -1.88
SPB4YFL002C RFA3P26755 122 aaKnown RBP3.32□□□□□ -1.88
SPB4YFL002C FMP46P36141 133 aaKnown RBP3.32□□□□□ -1.88
SPB4YFL002C RFT1P38206 574 aaPredicted RBP3.32□□□□□ -1.88
SPB4YFL002C IKI1P38874 309 aa3.32□□□□□ -1.88
SPB4YFL002C SEN34P39707 275 aa3.32□□□□□ -1.88
SPB4YFL002C KRE29P40026 464 aa3.32□□□□□ -1.88
SPB4YFL002C AVT7P40501 490 aa3.32□□□□□ -1.88
SPB4YFL002C YFL064CP43540 174 aa3.32□□□□□ -1.88
SPB4YFL002C NIF3P53081 288 aa3.32□□□□□ -1.88
SPB4YFL002C YDR115WQ04598 105 aa3.32□□□□□ -1.88
SPB4YFL002C YPL278CQ08990 100 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms