RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C UTP15Q04305 513 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C TAF9Q05027 157 aa1.06□□□□□ -2.24
SWI4YER111C ARC18Q05933 178 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C PEX30Q06169 523 aa1.06□□□□□ -2.24
SWI4YER111C SFM1Q12314 213 aa1.06□□□□□ -2.24
SWI4YER111C WTM1Q12363 437 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C FLO11P08640 1367 aa1.05□□□□□ -2.24
SWI4YER111C SAL1D6W196 494 aa1.05□□□□□ -2.24
SWI4YER111C ATP6P00854 259 aa1.05□□□□□ -2.24
SWI4YER111C CDC36P06100 191 aaPredicted RBP1.05□□□□□ -2.24
SWI4YER111C MATALPHA1P0CY06 175 aa1.05□□□□□ -2.24
SWI4YER111C HMLALPHA1P0CY07 175 aa1.05□□□□□ -2.24
SWI4YER111C NHP6BP11633 99 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C CBF5P33322 483 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SWI4YER111C RFT1P38206 574 aaPredicted RBP1.05□□□□□ -2.24
SWI4YER111C OM14P38325 134 aa1.05□□□□□ -2.24
SWI4YER111C YER085CP40058 173 aa1.05□□□□□ -2.24
SWI4YER111C UTP18P40362 594 aaPredicted RBP1.05□□□□□ -2.24
SWI4YER111C COG7P53195 279 aa1.05□□□□□ -2.24
SWI4YER111C YGR015CP53208 328 aa1.05□□□□□ -2.24
SWI4YER111C ASI3P53983 676 aa1.05□□□□□ -2.24
SWI4YER111C KTR6P54070 446 aa1.05□□□□□ -2.24
SWI4YER111C EBS1Q03466 884 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C GTO3Q04806 366 aa1.05□□□□□ -2.24
SWI4YER111C YLR446WQ06204 433 aa1.05□□□□□ -2.24
SWI4YER111C YPL245WQ12179 454 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C NUP157P40064 1391 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C IFM1P25038 676 aa1.05□□□□□ -2.24
SWI4YER111C MCH2P36032 473 aa1.05□□□□□ -2.24
SWI4YER111C MAL32P38158 584 aa1.05□□□□□ -2.24
SWI4YER111C MRP21P38175 177 aa1.05□□□□□ -2.24
SWI4YER111C YBR062CP38239 180 aa1.05□□□□□ -2.24
SWI4YER111C KRE29P40026 464 aa1.05□□□□□ -2.24
SWI4YER111C MAL12P53341 584 aa1.05□□□□□ -2.24
SWI4YER111C IMP4P53941 290 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C VBA1Q04301 562 aa1.05□□□□□ -2.24
SWI4YER111C PEX10Q05568 337 aa1.05□□□□□ -2.24
SWI4YER111C BOP2Q06150 570 aa1.05□□□□□ -2.24
SWI4YER111C RRS1Q08746 203 aaKnown RBP1.05□□□□□ -2.24
SWI4YER111C MCT1Q12283 360 aa1.05□□□□□ -2.24
SWI4YER111C PRM4Q12498 284 aa1.05□□□□□ -2.24
SWI4YER111C COX2P00410 251 aa1.04□□□□□ -2.24
SWI4YER111C PHO2P07269 559 aa1.04□□□□□ -2.24
SWI4YER111C MSF1P08425 469 aa1.04□□□□□ -2.24
SWI4YER111C VPS3P23643 1011 aa1.04□□□□□ -2.24
SWI4YER111C SGE1P33335 543 aa1.04□□□□□ -2.24
SWI4YER111C RTR1P40084 226 aaPredicted RBP1.04□□□□□ -2.24
SWI4YER111C REE1P40893 198 aa1.04□□□□□ -2.24
SWI4YER111C YGL262WP53054 175 aa1.04□□□□□ -2.24
SWI4YER111C YGL118CP53132 145 aa1.04□□□□□ -2.24
SWI4YER111C ZRG17P53735 605 aa1.04□□□□□ -2.24
SWI4YER111C YNR066CP53752 436 aa1.04□□□□□ -2.24
SWI4YER111C BOR1P53838 576 aa1.04□□□□□ -2.24
SWI4YER111C YNL095CP53932 642 aa1.04□□□□□ -2.24
SWI4YER111C MRS2Q01926 470 aa1.04□□□□□ -2.24
SWI4YER111C TLG1Q03322 224 aa1.04□□□□□ -2.24
SWI4YER111C YOR376WQ08900 122 aa1.04□□□□□ -2.24
SWI4YER111C HRT3Q12347 344 aa1.04□□□□□ -2.24
SWI4YER111C YPL119C-AQ3E751 87 aa1.04□□□□□ -2.24
SWI4YER111C PSK1P31374 1356 aa1.04□□□□□ -2.24
SWI4YER111C SAC3P46674 1301 aa1.04□□□□□ -2.24
SWI4YER111C RPS3P05750 240 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C ARG80P07249 177 aa1.04□□□□□ -2.24
SWI4YER111C TCP1P12612 559 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C RPL24BP24000 155 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C RNA15P25299 296 aaPredicted RBP1.04□□□□□ -2.24
SWI4YER111C RRT12P25381 491 aa1.04□□□□□ -2.24
SWI4YER111C YKT6P36015 200 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C PRS4P38063 326 aaPredicted RBP1.04□□□□□ -2.24
SWI4YER111C GGC1P38988 300 aa1.04□□□□□ -2.24
SWI4YER111C SEN34P39707 275 aa1.04□□□□□ -2.24
SWI4YER111C DDI1P40087 428 aa1.04□□□□□ -2.24
SWI4YER111C AVT7P40501 490 aa1.04□□□□□ -2.24
SWI4YER111C SNM1P40993 198 aa1.04□□□□□ -2.24
SWI4YER111C GAB1P41733 394 aa1.04□□□□□ -2.24
SWI4YER111C YPI1P43587 155 aa1.04□□□□□ -2.24
SWI4YER111C ASG7P46993 209 aa1.04□□□□□ -2.24
SWI4YER111C GIM3P53900 129 aa1.04□□□□□ -2.24
SWI4YER111C YMR244WQ04018 355 aa1.04□□□□□ -2.24
SWI4YER111C BNA7Q04066 261 aa1.04□□□□□ -2.24
SWI4YER111C SDO1Q07953 250 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C YPL150WQ12152 901 aa1.04□□□□□ -2.24
SWI4YER111C MSH5Q12175 901 aa1.04□□□□□ -2.24
SWI4YER111C SNF8Q12483 233 aa1.04□□□□□ -2.24
SWI4YER111C YBL111CQ3E7Y5 667 aa1.04□□□□□ -2.24
SWI4YER111C TDH2P00358 332 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C RPB4P20433 221 aaPredicted RBP1.04□□□□□ -2.24
SWI4YER111C QRI5P32344 111 aa1.04□□□□□ -2.24
SWI4YER111C YEL045CP32616 141 aa1.04□□□□□ -2.24
SWI4YER111C PRS2P38620 318 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C CHL4P38907 458 aa1.04□□□□□ -2.24
SWI4YER111C RRT13P40042 185 aa1.04□□□□□ -2.24
SWI4YER111C ALD5P40047 520 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C YPT32P51996 222 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C RHO3Q00245 231 aaKnown RBP1.04□□□□□ -2.24
SWI4YER111C MRPS16Q02608 121 aa1.04□□□□□ -2.24
SWI4YER111C YML018CQ03730 393 aa1.04□□□□□ -2.24
SWI4YER111C GRX3Q03835 250 aa1.04□□□□□ -2.24
SWI4YER111C API2Q04413 109 aa1.04□□□□□ -2.24
SWI4YER111C MIM1Q08176 113 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms