RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeast

Gene UBC6, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC6	YER100W	ERG28	P40030	148 aa		4.18	□□□□□ -1.74
UBC6	YER100W	PRE6	P40303	254 aa	Known RBP	4.18	□□□□□ -1.74
UBC6	YER100W	UTP18	P40362	594 aa	Predicted RBP	4.18	□□□□□ -1.74
UBC6	YER100W	GAB1	P41733	394 aa		4.18	□□□□□ -1.74
UBC6	YER100W	YGL260W	P53056	76 aa		4.18	□□□□□ -1.74
UBC6	YER100W	LIF1	P53150	421 aa		4.18	□□□□□ -1.74
UBC6	YER100W	ZRG17	P53735	605 aa		4.18	□□□□□ -1.74
UBC6	YER100W	LOA1	Q06508	300 aa		4.18	□□□□□ -1.74
UBC6	YER100W	YKL183C-A	Q3E765	70 aa		4.18	□□□□□ -1.74
UBC6	YER100W	RAD51	P25454	400 aa		4.17	□□□□□ -1.74
UBC6	YER100W	TIP20	P33891	701 aa		4.17	□□□□□ -1.74
UBC6	YER100W	JEN1	P36035	616 aa		4.17	□□□□□ -1.74
UBC6	YER100W	MRP21	P38175	177 aa		4.17	□□□□□ -1.74
UBC6	YER100W	RFT1	P38206	574 aa	Predicted RBP	4.17	□□□□□ -1.74
UBC6	YER100W	FZO1	P38297	855 aa		4.17	□□□□□ -1.74
UBC6	YER100W	CUE1	P38428	203 aa		4.17	□□□□□ -1.74
UBC6	YER100W	YER034W	P40022	185 aa	Known RBP	4.17	□□□□□ -1.74
UBC6	YER100W	STB1	P42845	420 aa		4.17	□□□□□ -1.74
UBC6	YER100W	MIC26	P50087	233 aa		4.17	□□□□□ -1.74
UBC6	YER100W	SDC1	Q03323	175 aa		4.17	□□□□□ -1.74
UBC6	YER100W	YMR166C	Q03829	368 aa		4.17	□□□□□ -1.74
UBC6	YER100W	DIB1	Q06819	143 aa	Predicted RBP	4.17	□□□□□ -1.74
UBC6	YER100W	MMT2	Q08970	484 aa		4.17	□□□□□ -1.74
UBC6	YER100W	SNU23	Q12368	194 aa	Predicted RBP	4.17	□□□□□ -1.74
UBC6	YER100W	RPL21B	Q12672	160 aa	Known RBP	4.17	□□□□□ -1.74
UBC6	YER100W	ASP3-2	P0CX77	362 aa		4.16	□□□□□ -1.74
UBC6	YER100W	ASP3-3	P0CX78	362 aa		4.16	□□□□□ -1.74
UBC6	YER100W	ASP3-4	P0CX79	362 aa		4.16	□□□□□ -1.74
UBC6	YER100W	ASP3-1	P0CZ17	362 aa		4.16	□□□□□ -1.74
UBC6	YER100W	POX1	P13711	748 aa		4.16	□□□□□ -1.74
UBC6	YER100W	EHD3	P28817	500 aa		4.16	□□□□□ -1.74
UBC6	YER100W	MED8	P38304	223 aa		4.16	□□□□□ -1.74
UBC6	YER100W	YFL064C	P43540	174 aa		4.16	□□□□□ -1.74
UBC6	YER100W	YPI1	P43587	155 aa		4.16	□□□□□ -1.74
UBC6	YER100W	IMP4	P53941	290 aa	Known RBP	4.16	□□□□□ -1.74
UBC6	YER100W	ATG17	Q06410	417 aa		4.16	□□□□□ -1.74
UBC6	YER100W	YOR376W	Q08900	122 aa		4.16	□□□□□ -1.74
UBC6	YER100W	YDR018C	Q12185	396 aa		4.16	□□□□□ -1.74
UBC6	YER100W	AI5_BETA	Q9ZZX0	354 aa		4.16	□□□□□ -1.74
UBC6	YER100W	RPL4A	P10664	362 aa	Known RBP	4.15	□□□□□ -1.75
UBC6	YER100W	ATG15	P25641	520 aa		4.15	□□□□□ -1.75
UBC6	YER100W	SSO1	P32867	290 aa		4.15	□□□□□ -1.75
UBC6	YER100W	YPT53	P36019	220 aa		4.15	□□□□□ -1.75
UBC6	YER100W	CBT1	P36038	271 aa	Predicted RBP	4.15	□□□□□ -1.75
UBC6	YER100W	MRPL3	P36516	390 aa		4.15	□□□□□ -1.75
UBC6	YER100W	FRM2	P37261	193 aa		4.15	□□□□□ -1.75
UBC6	YER100W	YBR096W	P38256	230 aa		4.15	□□□□□ -1.75
UBC6	YER100W	GGC1	P38988	300 aa		4.15	□□□□□ -1.75
UBC6	YER100W	RPL4B	P49626	362 aa	Known RBP	4.15	□□□□□ -1.75
UBC6	YER100W	RMI1	Q02685	241 aa		4.15	□□□□□ -1.75
UBC6	YER100W	YML122C	Q03207	126 aa		4.15	□□□□□ -1.75
UBC6	YER100W	YPR098C	Q06089	161 aa		4.15	□□□□□ -1.75
UBC6	YER100W	COQ10	Q08058	207 aa		4.15	□□□□□ -1.75
UBC6	YER100W	RFM1	Q12192	310 aa		4.15	□□□□□ -1.75
UBC6	YER100W	TRM10	Q12400	293 aa		4.15	□□□□□ -1.75
UBC6	YER100W	YPL119C-A	Q3E751	87 aa		4.15	□□□□□ -1.75
UBC6	YER100W	ISY1	P21374	235 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC6	YER100W	DPB2	P24482	689 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC6	YER100W	MRPL10	P36520	322 aa		4.14	□□□□□ -1.75
UBC6	YER100W	IGD1	P43598	195 aa		4.14	□□□□□ -1.75
UBC6	YER100W	CWC23	P52868	283 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC6	YER100W	CDC123	Q05791	360 aa		4.14	□□□□□ -1.75
UBC6	YER100W	TLG2	Q08144	397 aa		4.14	□□□□□ -1.75
UBC6	YER100W	ABP140	Q08641	628 aa	Known RBP	4.14	□□□□□ -1.75
UBC6	YER100W	CLP1	Q08685	445 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC6	YER100W	RRG7	Q08774	242 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC6	YER100W	SPT3	P06844	337 aa		4.13	□□□□□ -1.75
UBC6	YER100W	CAM1	P29547	415 aa	Known RBP	4.13	□□□□□ -1.75
UBC6	YER100W	PRX1	P34227	261 aa	Known RBP	4.13	□□□□□ -1.75
UBC6	YER100W	WSC4	P38739	605 aa		4.13	□□□□□ -1.75
UBC6	YER100W	KRE29	P40026	464 aa		4.13	□□□□□ -1.75
UBC6	YER100W	RRG9	P40156	214 aa		4.13	□□□□□ -1.75
UBC6	YER100W	YNL194C	P40169	301 aa		4.13	□□□□□ -1.75
UBC6	YER100W	NSA1	P53136	463 aa	Predicted RBP	4.13	□□□□□ -1.75
UBC6	YER100W	MRX11	Q03079	207 aa		4.13	□□□□□ -1.75
UBC6	YER100W	VHS1	Q03785	461 aa		4.13	□□□□□ -1.75
UBC6	YER100W	YMR114C	Q04471	368 aa	Known RBP	4.13	□□□□□ -1.75
UBC6	YER100W	YDR115W	Q04598	105 aa		4.13	□□□□□ -1.75
UBC6	YER100W	DXO1	Q06349	442 aa		4.13	□□□□□ -1.75
UBC6	YER100W	PLB3	Q08108	686 aa		4.13	□□□□□ -1.75
UBC6	YER100W	RRS1	Q08746	203 aa	Known RBP	4.13	□□□□□ -1.75
UBC6	YER100W	YMR316C-A	I2HB70	103 aa		4.12	□□□□□ -1.75
UBC6	YER100W	RPL27A	P0C2H6	136 aa	Known RBP	4.12	□□□□□ -1.75
UBC6	YER100W	RPL27B	P0C2H7	136 aa	Known RBP	4.12	□□□□□ -1.75
UBC6	YER100W	NTF2	P33331	125 aa	Known RBP	4.12	□□□□□ -1.75
UBC6	YER100W	TAF14	P35189	244 aa		4.12	□□□□□ -1.75
UBC6	YER100W	GOS1	P38736	223 aa		4.12	□□□□□ -1.75
UBC6	YER100W	SEN34	P39707	275 aa		4.12	□□□□□ -1.75
UBC6	YER100W	MIC19	P43594	170 aa		4.12	□□□□□ -1.75
UBC6	YER100W	MGA1	P53050	456 aa		4.12	□□□□□ -1.75
UBC6	YER100W	CTF19	Q02732	369 aa		4.12	□□□□□ -1.75
UBC6	YER100W	SRO7	Q12038	1033 aa		4.12	□□□□□ -1.75
UBC6	YER100W	HRT3	Q12347	344 aa		4.12	□□□□□ -1.75
UBC6	YER100W	WTM1	Q12363	437 aa	Known RBP	4.12	□□□□□ -1.75
UBC6	YER100W	DCN1	Q12395	269 aa		4.12	□□□□□ -1.75
UBC6	YER100W	BCY1	P07278	416 aa	Known RBP	4.11	□□□□□ -1.75
UBC6	YER100W	MATALPHA2	P0CY08	210 aa		4.11	□□□□□ -1.75
UBC6	YER100W	HMLALPHA2	P0CY09	210 aa		4.11	□□□□□ -1.75
UBC6	YER100W	ARC19	P33204	171 aa	Known RBP	4.11	□□□□□ -1.75
UBC6	YER100W	YHI9	P38765	294 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms